Transcript Information: S_Transcript_132008.p1


Annotated TAIR IDAT5G50350.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to oxidative stress; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:20498697-20501611 | Reverse length=584
E-Value1E-07
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.3268197801251
Replicate 21.3261786072823
Replicate 31.5116996789837
Condition 2: 8 Hour
Replicate 10.93225750020253
Replicate 20.9780043121192
Replicate 31.5142405402446
Condition 3: 24 Hour
Replicate 11.1937094803603
Replicate 21.3623056138788
Replicate 31.2404284133664


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_132008.p1 GENE.S_Transcript_132008~~S_Transcript_132008.p1 ORF type:5prime_partial len:183 (-),score=23.95 S_Transcript_132008:67-615(-)
TTCACTAGAATGGCTACAGCAGCCTTCAGGTCCACCACAAGAAGGACCTCAATCGGCGACTCTTCTTCTTCTTCTTCTTCTTCATCTTCTTCGTCGAACCGAAACTCCTCAATCCACCGGAGGTCTAGGAGTGTCAGCCGTTTCTCTCACCGTATACTGCCAGACGACACGTCGGAGGACACCTCGGTAAATCGTAAGGGCAAATTCGTCAACACAGTAAGAGGTTCGGGTGTGCCGGAGATAAGCCTTGATGATCTGGCCATTGAGCTTTTCTCGTCTAGCGATTTCGGAGATAGTAGAGGTAGGCAGCAGCAGAAGGTGACGTCAGCTGACGTCAATGATGATACGACGTCTTGCAGAAGGAGAGGGAGGTCGGTTTCGAGGCGAGGTTCAAGAGTTGGTGAATTGAGAAATAATTTGAGTGTCAAGAATGGCGGTAATAATATCAATGAGAGGGTTTCTGATGGAAATTCCAGGAGGAGGAGGTCGCTTTCGGTGGTTTCTCATTCTCGCCTAATTAGCGATTCTGAGGTAAGAGATAATTCCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_132008.p1 GENE.S_Transcript_132008~~S_Transcript_132008.p1 ORF type:5prime_partial len:183 (-),score=23.95 S_Transcript_132008:67-615(-)
FTRMATAAFRSTTRRTSIGDSSSSSSSSSSSSNRNSSIHRRSRSVSRFSHRILPDDTSEDTSVNRKGKFVNTVRGSGVPEISLDDLAIELFSSSDFGDSRGRQQQKVTSADVNDDTTSCRRRGRSVSRRGSRVGELRNNLSVKNGGNNINERVSDGNSRRRRSLSVVSHSRLISDSEVRDNS*

Click here to download the sequence:
Link to NCBI Protein BLAST