Transcript Information: S_Transcript_132013.p1


Annotated TAIR IDAT1G67180.1
Annotated Gene Namezinc finger (C3HC4-type RING finger) family protein / BRCT domain-containing protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:25130099-25132169 | Forward length=453
E-Value4.1E-93
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.3361305474836
Replicate 23.415014269595
Replicate 33.1176111913215
Condition 2: 8 Hour
Replicate 12.3887911760536
Replicate 23.1894692561728
Replicate 34.4281394209941
Condition 3: 24 Hour
Replicate 12.491473473469
Replicate 22.6310331157878
Replicate 32.5684362938


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_132013.p1 GENE.S_Transcript_132013~~S_Transcript_132013.p1 ORF type:complete len:491 (+),score=81.37,PTCB-BRCT|PF12738.3|2.6e-20,zf-C3HC4|PF00097.21|1.8e-10,zf-C3HC4|PF00097.21|1.6e+04,BRCT|PF00533.22|1.1e-09,zf-RING_2|PF13639.2|4.1e-09,zf-RING_2|PF13639.2|4.7e+03,zf-C3HC4_3|PF13920.2|5e-09,zf-C3HC4_3|PF13920.2|1.6e+04,zf-C3HC4_2|PF13923.2|9.2e-08,zf-C3HC4_2|PF13923.2|1.6e+04 S_Transcript_132013:147-1619(+)
ATGATGGAAGGAATGGAATTCATTGTGGCAACTGTGAGTGGATATCACGGCTCTGAGAGGATGAAGCTCATCAAGCTTATCTCTCTCGCTGGTGCCAATTACGTCGGTAAAATGTCCAGATCTACCACTCATTTGGTTTGCTGGGAGTTTAAAGGGAGGAAATATGAACTGGCTAAAAAGTTTGGAACAATAATTCTCAACCATCGATGGCTTGAAGAATGTGTAAAGGAAGGGAAGCGTATTCCAGAGCATCCATACACTTTGCAAAGTGGGCAAGACGTCGGTTTGATAATCCTTGACCTCCCAGTTCTCACATCAAGTGTGCTAGCTGAAAATATGCTTCGATTGAACAAACCAAACATGTGTTATCGCCTGGCAGATGTGATTGATCTAGATTCTGATGAACTAGAGAATGATGGTTGGGATGTTGATTTCTTGCTGGATGAGAATTTGTTTCCAAAACGAGGGAGCAGGGAAACTGCTCGACGAGGATCTAAGAGAAGAGTAGACATGGAAACCTTCAATGAGAACCAGCGAGGAAAGGCAAATAACAGAAGGTCTTTTCGTGAGCCTCAGATACCTACAGTTCCCAGACTTAAGGGAAGAAGTGATGCAGTTATGAGCACGTTGATAGATTTACCTGAATCTTCACATAGAAGTCAGGAGCTTGTCAGAAAAAATGTGACGAGAAATGTCATTGACTTGGCTTTTGTTGATGTGGAACAAGATAGCAGAACACTAGCAAATGCTAATAATCTTACCTGCACTTCAAGCCTATCTAATAATTCGAATGATATTAGAGATGAGATTGAAGGACATATTGACCGAAGGCCAGGGATTTCTTCTACTGGAAATGGCACAAGTGACGATGAAGCAGCCAACCATCTGAATGCTACCGGTGCCCTTGGGGACACATGCACACATGGCGAGACCAGTCCTGATGTTGAGAGTTTGAATAGACAGCAGATAGATGATGATGTAGTTGACCAGTGTACCCAACTGCCTGTGTCATCAGACCGAGCATGTGTTATATGCTTCACAGAATCCAGTTCACAGAGGGGTGTTCTGCCATGTGGGCATCGGTTCTGTTTCAAATGCATCCGGGAGTGGGCTGATCGCAAGGCTTCAGAGAGGAAGGAGCCAAAGTGCCCTTTGTGCCAAGAAAGTTTTGCTAGCATAACAATAGTAGAGGATGCAGCCTCTCTGGACCAGAAAATTTACTCACAAACTGTTCCAAATGCTTCATCAACACAGGACTTATACATCGTCCCAGAGGGTGGAGCAGGTCATTCTGAGTTTCAGATTTTTCGCCCTTCTGCGTGTTGCATTTGTCAGAGCGAACATCCTATAGAGGGCCTTCTCCACTGTCAGATTTGCCGGATTACCTGCATCCATGATTACTGTATAGATCCTCCTGTATTCCCGTGGATATGCACTACCTGCAGAGATCATAGGCCGTTTTATCATCGCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_132013.p1 GENE.S_Transcript_132013~~S_Transcript_132013.p1 ORF type:complete len:491 (+),score=81.37,PTCB-BRCT|PF12738.3|2.6e-20,zf-C3HC4|PF00097.21|1.8e-10,zf-C3HC4|PF00097.21|1.6e+04,BRCT|PF00533.22|1.1e-09,zf-RING_2|PF13639.2|4.1e-09,zf-RING_2|PF13639.2|4.7e+03,zf-C3HC4_3|PF13920.2|5e-09,zf-C3HC4_3|PF13920.2|1.6e+04,zf-C3HC4_2|PF13923.2|9.2e-08,zf-C3HC4_2|PF13923.2|1.6e+04 S_Transcript_132013:147-1619(+)
MMEGMEFIVATVSGYHGSERMKLIKLISLAGANYVGKMSRSTTHLVCWEFKGRKYELAKKFGTIILNHRWLEECVKEGKRIPEHPYTLQSGQDVGLIILDLPVLTSSVLAENMLRLNKPNMCYRLADVIDLDSDELENDGWDVDFLLDENLFPKRGSRETARRGSKRRVDMETFNENQRGKANNRRSFREPQIPTVPRLKGRSDAVMSTLIDLPESSHRSQELVRKNVTRNVIDLAFVDVEQDSRTLANANNLTCTSSLSNNSNDIRDEIEGHIDRRPGISSTGNGTSDDEAANHLNATGALGDTCTHGETSPDVESLNRQQIDDDVVDQCTQLPVSSDRACVICFTESSSQRGVLPCGHRFCFKCIREWADRKASERKEPKCPLCQESFASITIVEDAASLDQKIYSQTVPNASSTQDLYIVPEGGAGHSEFQIFRPSACCICQSEHPIEGLLHCQICRITCIHDYCIDPPVFPWICTTCRDHRPFYHR*

Click here to download the sequence:
Link to NCBI Protein BLAST