Transcript Information: S_Transcript_132112.p1


Annotated TAIR IDAT4G32770.1
Annotated Gene Nametocopherol cyclase, chloroplast / vitamin E deficient 1 (VTE1) / sucrose export defective 1 (SXD1)
Annotated Gene Symbol(s)VTE1, ATSDX1
Annotation TypeHomolog
Chromosome Positionchr4:15804981-15807790 | Forward length=488
E-Value9E-46
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 111.039467179038
Replicate 215.362238654862
Replicate 312.97822168846
Condition 2: 8 Hour
Replicate 113.743029315486
Replicate 211.765935210523
Replicate 311.210556888546
Condition 3: 24 Hour
Replicate 115.534139371089
Replicate 211.415845831049
Replicate 311.209797513385


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_132112.p1 GENE.S_Transcript_132112~~S_Transcript_132112.p1 ORF type:5prime_partial len:135 (+),score=29.11,Tocopherol_cycl|PF14249.2|6.1e-22 S_Transcript_132112:1-405(+)
GAAAATGCAGCATTGGTCGGAGTCCACCATGCTGGGGTATTCTATGAATTTGTGCCATGGAATGGGGATGTTGAGTGGGAGATCAATCCATGGGGTTACTGGAAAATCTGTACGGATAATGGTTCATACAAGGTAGAATTGGTGGCAAGAACAGAGCATTCTGATACTTGTTTTGGTGAACTAAAATTGCAACTTTGGGAACGAAGATCAGACGGCAGCAAAGGAAAGGTTATTTTGGACGTGACAAGTCAGATGGTGGCACTAGAAGTTGGTGGTGGTCCGTGGTTCGAGACATGGAAAGGAAAAACCACGACACCAGAGATATTGAATCTTGCTCTTAAGGCTCCCATCGATGTGGAATCTGTATTCAGTTGGGTTCCATTTCTGAAACCCCCTGGTCTGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_132112.p1 GENE.S_Transcript_132112~~S_Transcript_132112.p1 ORF type:5prime_partial len:135 (+),score=29.11,Tocopherol_cycl|PF14249.2|6.1e-22 S_Transcript_132112:1-405(+)
ENAALVGVHHAGVFYEFVPWNGDVEWEINPWGYWKICTDNGSYKVELVARTEHSDTCFGELKLQLWERRSDGSKGKVILDVTSQMVALEVGGGPWFETWKGKTTTPEILNLALKAPIDVESVFSWVPFLKPPGL*

Click here to download the sequence:
Link to NCBI Protein BLAST