Transcript Information: S_Transcript_132118.p1


Annotated TAIR IDAT4G32770.1
Annotated Gene Nametocopherol cyclase, chloroplast / vitamin E deficient 1 (VTE1) / sucrose export defective 1 (SXD1)
Annotated Gene Symbol(s)VTE1, ATSDX1
Annotation TypeOrtholog
Chromosome Positionchr4:15804981-15807790 | Forward length=488
E-Value7.7E-175
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 114.24107089508
Replicate 214.536352986055
Replicate 313.323180582133
Condition 2: 8 Hour
Replicate 114.407119879802
Replicate 214.814802778147
Replicate 316.254224929551
Condition 3: 24 Hour
Replicate 114.611962201066
Replicate 220.010857043999
Replicate 313.412391506399


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_132118.p1 GENE.S_Transcript_132118~~S_Transcript_132118.p1 ORF type:5prime_partial len:299 (-),score=62.87,Tocopherol_cycl|PF14249.2|4.6e-110 S_Transcript_132118:273-1169(-)
CCAGAGGAGTTTAATAGAAGAGTTACAGAAGGTTATCAAGTGACCCCATTTTGGCATCAAGGATTTATTCGTGATGATGGCAGGTCAGATTTTGCTGAGATAGTGAAAACAGCTCGTTGGGAGTATAGTACCCGACCTGTATTTGGCTGGGGTAATGTCAGTTCTAAACAGAAATCAACTGCAGGTTGGTTTGCAGCTTTACCTGTTTTTGAACCTCACTGGCAAATATGCATTGGAGGGGGACTATCAACAGGTTGGATAGAGTGGGATGGTGAAAGGTTTGAGTTTGAGAATGCTCCTTCATATTCGGAAAAGAACTGGGGAGGAGGCTTTCCCAGAAAGTGGTTTTGGGTCCAATGTAATGTCTTTGAGGGTGCGACAGGAGACATTGCTTTGACTGCAGGTGGAGGGTTGAGAGAGCTTCCCAGAAATAAAATTGAAAATGCAGCATTGGTCGGAGTCCACCATGCTGGGGTATTCTATGAATTTGTGCCGTGGAATGGGGATGTTGAGTGGGAGATCACTCCATGGGGTTACTGGAAAATCTGTACGGATAATGGTTCATACAAGGTAGAATTGGAGGCAAGAACAGAGCATTCTGGTACACCCTTGCGTGCTCCTACACCGCAAGATGGTTTTGTTCCTTTTTGTAAAGATACTTGTTTTGGTGAACTAAAATTGCAACTTTGGGAACGAAGATCAGACGGCAGCAAAGGAAAGGTTATTTTGGACGTGACAAGTCAGATGGCGGCACTTGAAGTTGGTGGTGGACCGTGGTTCGAGACATGGAAAGGAAAAACCACGACACCAGAGATATTGAATCTTGCTCTTAAGGCTCCCATCGATGTGGAATCTGTATTCAGTTGGGTTCCATTTCTGAAACCCCCTGGTCTGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_132118.p1 GENE.S_Transcript_132118~~S_Transcript_132118.p1 ORF type:5prime_partial len:299 (-),score=62.87,Tocopherol_cycl|PF14249.2|4.6e-110 S_Transcript_132118:273-1169(-)
PEEFNRRVTEGYQVTPFWHQGFIRDDGRSDFAEIVKTARWEYSTRPVFGWGNVSSKQKSTAGWFAALPVFEPHWQICIGGGLSTGWIEWDGERFEFENAPSYSEKNWGGGFPRKWFWVQCNVFEGATGDIALTAGGGLRELPRNKIENAALVGVHHAGVFYEFVPWNGDVEWEITPWGYWKICTDNGSYKVELEARTEHSGTPLRAPTPQDGFVPFCKDTCFGELKLQLWERRSDGSKGKVILDVTSQMAALEVGGGPWFETWKGKTTTPEILNLALKAPIDVESVFSWVPFLKPPGL*

Click here to download the sequence:
Link to NCBI Protein BLAST