Transcript Information: S_Transcript_132142.p1


Annotated TAIR IDAT5G16250.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G02640.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:5310264-5310815 | Reverse length=183
E-Value2E-57
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 136.052095269333
Replicate 223.14962648153
Replicate 316.989121416913
Condition 2: 8 Hour
Replicate 120.695083214163
Replicate 211.241027395331
Replicate 317.115680589222
Condition 3: 24 Hour
Replicate 13.013087378013
Replicate 29.3781289281438
Replicate 312.051912843824


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_132142.p1 GENE.S_Transcript_132142~~S_Transcript_132142.p1 ORF type:5prime_partial len:203 (+),score=37.49 S_Transcript_132142:3-611(+)
GGGACTTCACTCACTCAATCACTCACTCAACTTCAAGAAATCTTGAAGAATCCTCTCAAATTGCACACAATCTCAAACAAAACACCCTCAAATCAACAAATGGGGCTAGCAATGAACAACCCATCAAGCAACGAGCCCCATTACAAGACCAAAAGACTCTTCCTTTACAGCAATTACCTCTTACTAGGAGCTGCCTCAAGCTGCATCTTCTTGACTCTTTCGCTCCGCCTAATACCATCCCTTTGTGGTTTCTTCTTCATCCTCCTTCACCTGATCACCATCCTAGGAGCCTTAGCCGGGTGCCACGCGGCCAGCCAAGGCGGGGCCAGGTGGTTTGGGGTCCACATGGTGGCAACTGTCCTAACAGCCATATTTCAGGGCTCACTCTCTGTACTGATCTTCACTAACAGTGATGATTTCCTCCAAAAGCTCAAGTCCTATGTGAATGAGGAAAATGGGGTTATGATCTTGAAGCTTGCTGGTGGGCTTTGTGCTGTGGTTGAAAGAACTGGGGAGGTTACTCTTGGTGCTAAGAGGAGTGCTAAGGTTGGTAGCTCGGAAGAGGAGATGGGGTACTTGCCTTATCCTTCTGCTGGTTTGAATGTCTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_132142.p1 GENE.S_Transcript_132142~~S_Transcript_132142.p1 ORF type:5prime_partial len:203 (+),score=37.49 S_Transcript_132142:3-611(+)
GTSLTQSLTQLQEILKNPLKLHTISNKTPSNQQMGLAMNNPSSNEPHYKTKRLFLYSNYLLLGAASSCIFLTLSLRLIPSLCGFFFILLHLITILGALAGCHAASQGGARWFGVHMVATVLTAIFQGSLSVLIFTNSDDFLQKLKSYVNEENGVMILKLAGGLCAVVERTGEVTLGAKRSAKVGSSEEEMGYLPYPSAGLNV*

Click here to download the sequence:
Link to NCBI Protein BLAST