Transcript Information: S_Transcript_132176.p1


Annotated TAIR IDAT1G07910.1
Annotated Gene NameRNAligase
Annotated Gene Symbol(s)ATRNL, RNL, AtRLG1
Annotation TypeOrtholog
Chromosome Positionchr1:2446712-2454386 | Forward length=1104
E-Value4.4E-248
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.392426531078
Replicate 23.5882339060573
Replicate 33.566946759026
Condition 2: 8 Hour
Replicate 14.3588160428426
Replicate 24.6710453203825
Replicate 34.0757774541393
Condition 3: 24 Hour
Replicate 14.0809123004407
Replicate 23.0882556433704
Replicate 33.880314523864


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_132176.p1 GENE.S_Transcript_132176~~S_Transcript_132176.p1 ORF type:3prime_partial len:455 (-),score=86.00 S_Transcript_132176:3-1364(-)
ATGATTCGCTTGATGAAAGAAAGGCGGTTTCCTGCTGCATTCAAGTGTTACTATAACTTGCACAAGGCCGACTCCATGTCCAATGACAATATATATTACAAGATGGTCATTCATGTGCACAGTGACTCAGCTTTCAGGCGATATCAGAAAGAGATGAGGCATGATCCTGGTCTCTGGCCATTATATAGAGGATTTTTTGTTGATATAAACTTGTTCAGAGAAAGCAAGGATAGAGTTGCTGAAGTTGGGAGAGACAGGACTGATACGAGAAATAAGGTTAATGGTAATGACGATGTCGCAGGAGTGGATTCACTTGCTGATGAAGACGCAAATTTGATGGTTAAATTGAAATTCCTCACATATAAGTTGCGAACTTTCTTGATCCGAAATGGTTTGTCGATCCTTTTCAAGGATGGCCCTACCTCTTATAGGACATATTATCTAAGACAAATGAAAATCTGGGGCACTTCAGCAGCAAAGCAAAAGGAACTGAGCAAGTTGCTTGATGAATGGGCTGTGCATATAAGAAGGAAGTGCGGCACGAAACAGTTGAGGTCTGATATATACCTTAGTGAGGCGGAGCCTTTCCTTGAACAATATGCCAGACGAAGTCCTGCAAATCAAGCACTCATAGGTTCAGCTGGAAACTTGATTAGATCTGAAGATTTCTTGGCCATTGTTGGAGATATAGATGAAGAGGGTGACCTTCAGAGAGAACGTGAAATGGAACCATCAACCCCACCTCCTATCACAAAAGAAGCTATACAGAAAAAAGAAGGTCTTATTGTATTCTTTCCAGGGATACCAGGCTGTGCTAAGTCTGCACTTTGCAAGGAACTACTAAATGCCCCTGGTGGTTTTGGAGATGATCGTCCTATTCAAAGTCTAATGGGTGATCTCGTTAAAGGACGATACTGGCAGAAAGTTGCTGATGAATGCAAAAGAAAACGCAATTCTATAATGCTTGCTGACAAAAATGCGCCAAATGAGGAAGTTTGGAGACAGATTGAGAACATGTGTCAAACCACCAAGGCATCTGCTGTTCCAGTCATACCAGATTCTACAGGCTCTGATTCAAATCCTTTTTCATTGGATGCATTGGCTGTCTTTATGTTTCGTGTGCTTCAACGAGTTAATCATCCGGGAAATCTTGACAAGGCATCTCCAAATGCTGGCTTTGTATTACTAATGTTTTACCACCTTTATGAGGGCAAGAGCCGCAAAGAATTTGAAGCTGGACTAATTGAACGGTTTGGTTCACTTGCAAAGATGCCCTTGCTCAAACCAGAAAGCCCTTGTCTACCTGATTCTGTCAAATCAATGTTGGAAGAGGGGATCGACCTATACAGGCTACATACTAAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_132176.p1 GENE.S_Transcript_132176~~S_Transcript_132176.p1 ORF type:3prime_partial len:455 (-),score=86.00 S_Transcript_132176:3-1364(-)
MIRLMKERRFPAAFKCYYNLHKADSMSNDNIYYKMVIHVHSDSAFRRYQKEMRHDPGLWPLYRGFFVDINLFRESKDRVAEVGRDRTDTRNKVNGNDDVAGVDSLADEDANLMVKLKFLTYKLRTFLIRNGLSILFKDGPTSYRTYYLRQMKIWGTSAAKQKELSKLLDEWAVHIRRKCGTKQLRSDIYLSEAEPFLEQYARRSPANQALIGSAGNLIRSEDFLAIVGDIDEEGDLQREREMEPSTPPPITKEAIQKKEGLIVFFPGIPGCAKSALCKELLNAPGGFGDDRPIQSLMGDLVKGRYWQKVADECKRKRNSIMLADKNAPNEEVWRQIENMCQTTKASAVPVIPDSTGSDSNPFSLDALAVFMFRVLQRVNHPGNLDKASPNAGFVLLMFYHLYEGKSRKEFEAGLIERFGSLAKMPLLKPESPCLPDSVKSMLEEGIDLYRLHTK

Click here to download the sequence:
Link to NCBI Protein BLAST