Transcript Information: S_Transcript_13239.p1


Annotated TAIR IDAT3G60860.1
Annotated Gene NameSEC7-like guanine nucleotide exchange family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:22484804-22491510 | Forward length=1793
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 118.627616592388
Replicate 219.970946710455
Replicate 321.384522207365
Condition 2: 8 Hour
Replicate 126.939213088849
Replicate 225.940364373671
Replicate 325.987977057718
Condition 3: 24 Hour
Replicate 119.664050169447
Replicate 218.454637424131
Replicate 319.66559848207


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_13239.p1 GENE.S_Transcript_13239~~S_Transcript_13239.p1 ORF type:complete len:1793 (+),score=332.37,Sec7|PF01369.16|1.4e-69,Sec7|PF01369.16|7.7e+03,Sec7|PF01369.16|7.3e+03,Sec7_N|PF12783.3|1.3e-44,Sec7_N|PF12783.3|7.7e+03,Sec7_N|PF12783.3|2.9e+03,Sec7_N|PF12783.3|7.9e+02,Sec7_N|PF12783.3|1.7e+02,DCB|PF16213.1|4.4e-41,DCB|PF16213.1|1.1e+03,DUF1981|PF09324.6|2.3e+02,DUF1981|PF09324.6|4.7e+03,DUF1981|PF09324.6|9e+02,DUF1981|PF09324.6|67,DUF1981|PF09324.6|8.6e-32,Mon2_C|PF16206.1|4.7e-11 S_Transcript_13239:393-5771(+)
ATGGCTTCTTCGGAAGCCGATTCCCGTCTTAAGCTGGTATTGGCCCCTTCTTTAGAGAAGATAATCAAGAATGGGTCATGGCGAAAGAACTCGAAGCTCGTTCACGAGTGTAAATCTCTTCTCGAGAAGCTCAATTCTAACCCCCACTCTCTCTCCTCCCCCGATTCTCCTACTTCTGAATCCGGAGCTCCGGGCCCAGTCCACGATGGCGGTGCTCACGAGTACTCTATGTCGGATTCTGATGTCATCTTGTCTCCTTTTATTAACGCTTGTTGTTCCGGTAATGTTAAGATCGCTGATGCTGGCCTTGATTGTATTCAGAAACTCATCGCTCATGGTTATCTCCGAGGTGAGGCTGACCTGGCCGGGTCAAACCCTGAATCGAAGCTGTTGAACCGAGTTATTGACTCGGTTTGTAAGTGTAGTGAGATTAATGACGAGAATATTGAGCTTAATGTTCTCAAAACCCTACTTTCTGCCGTTACTTCGACTAGTCTTAGAATTCACGGTGATTGTTTGTTACAGATTGTTAGGACTTGTTATGATATTTATTTAGGGAGTAAGAATGTGGTGAATCAGACCACGGCAAAAGCGTCGTTGATCCAGATGCTCGTGATCGTTTTCCGGCGAATGGAGGCCGATTCGTCCACTGTACCCGTCCAGCCGATCGTTGTGGCCGAGCTCATGGAGCCGCCGGAGAAGTCCGATGCTGATCCCGGGATGACGCAGTTCGTGCAAGGGTTCATCACCAGGATTATGCAGGACATTGATGGTGTGTTGAACCCTGTGGCATTGCCTGAAAAGGGTGGTGGTGGGGCTGCCGTTCACGATGGGGCGTTTGAGACGAGGATTAATGCCACGGTGGAGGGGACTAATCCGGCAGATTTGTTGGATTCTACCGATAAGGATATGTTGGATGCCAAGTATTGGGAGATTAGTATGTATAAGTCGGCATTAGAAGGGAGGAAAGGGGAGTTGGCTGACGGGGAAGAAGGGGCTGCGGCCGCGGTGGCGGGGATGGTGGAGAGAGATGATGATTTGGAGGTTCAGATTGGGAACAAGTTGAGGCGGGACGCGTTCTTGGTGTTTCGGGCTCTTTGTAAGTTGTCCATGAAGACTCCCCCTAAAGAGGCATTGCAGGATCCTCAGCTTATGAGGGGGAAGATTGTTGCCCTTGAGTTGCTCAAGATTTTGTTGGAGAATGCTGGCGCCATCTTTAGGACCAGTGACAGATTTTTGGGTGCTATCAAGCAGTACCTCTGTTTGTCATTGCTTAAGAACAGCGCTTCAACTTTGATGATTGTTTTCCAGCTTTCATGCTCCATCTTTATGAGTTTGGTAGCAAGATTTAGAGCAGGCCTGAAGGCAGAAATTGGGGTTTTCTTCCCTATGATAGTCCTTAGAGTTCTGGAAAATGTAGCTCAACCAAATTTTCAGCAGAAGATGATAGTGCTGCGATTTTTGGAAAAACTCTGTGAAGATTCCCAGATATTGGTGGACATATTCATTAATTATGACTGTGATGTCAATTCATCTAACATATTTGAGAGAATGGTCAATGGCCTTCTTAAAACTGCTCAAGGTGTCCCACCTGGGGTTACCACCACATTGTTGCCACCACAAGAAGTCACTCTTAAATTTGAAGCAATGAAGTCTTTGGTGGCTGTTCTAAAATCCATGGGGGACTGGATGAACCGACAATTGCGGATCCCAGATCCTCATTCAGCAAAGAGGTATGAACCAGCTGAGAACAGTCCTGAAGTTGGTAGTCCTCATCTGGCAAATGGAAATGGGGATGAGGCTTCAGAAGGATCTGATGTTCCTTCTGAATCTTCGAATGACATCTCGGACGTGCAAACAATTGAGCAGCGCCGAGCATACAAGCTGGAACTTCAGGAAGGTATATCTCTTTTCAATAGGAAACCAAAAAAGGGGATTGAGTTCCTTATCAATGCTAATAAGGTGGGGAGTTCACCAGAGGAAATAGCCACATTTCTTAAAGATGCTTCTGGTCTGAACAAGACTTTGATTGGTGATTATCTTGGGGAAAGAGAAGAAATGTCATTGAAAGTTATGCATTCATATGTTGATTCCTTTGACTTCCAAGGAAAGCAGCTAGATGAAGCAATTAGGGTTTTTCTCCAAGGTTTTAGATTGCCTGGTGAGGCCCAGAAGATTGACCGGATCATGGAGAAATTTGCTGAACGTTACTGGAAATGTAATCCAAAAGCATTCTCCAGTGCAGACACTGCCTATGTCCTTGCCTATTCTGTCATAATGCTCAACACCGATGCCCATAATCCTATGGTTAAGAACAAGATGTCTGCAGAAGACTTTATTAGAAACAATCGTGGCATAGATGATGGGAAAGATCTCCCTGAAGAGTATATGAGATCTTTGTATGAAAGAATTACCAAAAATGAGATTAAGATGAAGGAAGATGACTTGGCGGTTCAACAAAAACAATCTATAAATTCCAACAAAATCCTAGGCTTGGACAGTATCTTGAATATTGTGATCCGTAAGCGAGGAGAGGAGATGGAGACCAGTGATGATCTCATCAGGCATATGCAAGAACAGTTTAAAGAAAAAGCTCGCAAGTCCGAGTCAGCTTATTATGCAGCAACAGATGTTGTGATCCTTAGGTTCATGATTGAGGTTTGCTGGGCTCCTATGCTGGCTGCTTTCAGTGTTCCACTTGATCAAAGTGATGATGAAGTGATTATATCCTTGTGTCTTGAAGGTTTTCGTAGTGCGATTCATGTTACTTCAGTGATGTCCATGAAGACTCACAGAGATGCTTTCGTCACATCACTAGCAAAGTTCACCTCTCTCCACTCACCTGCTGATATCCAACAAAAAAACATATATGCTATCAAGGCAATAGTCACAATCGCAGATGAAGATGGGAATTACTTGCAAGAAGCATGGGAGCATATCTTGACATGTGTTTCCCGCTTCGAACATTTACACCTCCTTGGAGAAGGTGCTCCTCCTGATGCAACTTTCTTTGCTATACCTCAAAGTGATCAAGAAAAGTCAAGACAGGCAAAGTCTAACATCCTTCCACTTTTGAAGAAGAAGGGAGCTGGAAAAATTCAATATGCTGCAGCTGCAGTGAGAAGAGGTTCTTACGATAGTGCTGGTATTGGTGGCAATGCCTCCGTTACATCTGAACAGATGAATAATCTAGTCTCTAATCTGAACATGCTTGAACAAGTTGGAAGCGCTGAAATGAATCGGATATTTACTCGAAGTCAAAAGTTAAACAGTGAGGCAATCATTGATTTTGTTAAGGCACTATGTAAGGTCTCCATAGACGAATTACGATCTGCCTCTGATCCACGAGTCTTCAGCCTGACAAAGATTGTTGAGATTGCGCACTACAACATGAACCGCATTAGGCTTGTTTGGTCAAGCATCTGGCATGTGCTTGCTGACTTCTTTGTAGCCATCGGGTGTTCTGAAAATCTTTCTATTGCTATTTTTGCTATGGACTCATTGCGTCAATTGTCTATGAAGTTTTTGGAACGAGAAGAATTGGCTAATTATAATTTTCAAAATGAGTTTATGAAGCCCTTTGTGGTTGTTATGCGGAAGAGTAGTGCTGTTGAGATCCGGGAATTAATAATCAGATGTGTGTCTCAGATGGTGTTATCCAGAGTGAATAACGTCAAGTCTGGATGGAAGAGCATGTTCATGGTCTTCACCACTGCAGCTTATGATGATCACAAGAACATAGTTCTCTTAGCATTTGAGATAATGGAGAAGATTGTACGAGACTACTTCCCATATATCACAGAGACAGAAACCACTACCTTTACAGACTGCGTAAATTGCCTCATTGCATTCACGAATAGCAGATTCAACAAGGACATTAGTCTCAGCGCCATTGGCTTTCTGCGCTACTGTGCAGAGAAGCTTGCTGAAGGAGATCTTGGTTCTTCAGGTAAAAGTAAGGATAAAGAGACTTCTGGGAATCTGTCTCCATCATCACCTCAAACAACAAAGGATGGAAAGCTGGAAAATGGAGAGCTAAATGATAAGGAAGATCATCTATATTTCTGGTTTCCTTTGTTGGCTGGACTCTCAGAACTTAGCTTTGACCCCAGACCTGAAATCAGAAAAAGTGCGCTACAGATTTTGTTTGATACATTACGGAACTATGGGCAACATTTTTCACTTCCTTTGTGGGAGAAAGTGTTTGAATCAGTTTTGTTTCGCATTTTTGATTATGTTCGCCATGCTGTTGATCCATCCATGGAGAACCCATCTGGAGAGAGCAGTGATAGTGAGATAGCCGAATTTGATCAAGATTCATGGTTGTATGAGACATGTACTTCGTCTCTCGAGCTAATTGTAGACCTGTTTGTAAAATTCTACTCCACTGTCAATCCCCTGTTGAAGAAGGTTCTGATGCTATTAGTAAGCTTCATCAAGCGTCCTCACCAAAGCCTTGCTGGGATTGGTATTGCGGCATTAGTAAGATTGATTAGCAATGCTGGAGATCTCTTTGTGGATGACAAATGGCTTGAAGTGGTTTCTTCTTTGAAAGAAGCAGCTACTTCTACCCTTCCAGATTTTTCCTTTATTTTTGACGGGGATAGTTTAGTTAGAAGTAGCGAAGAATCTGTTAGTAGACAAGGTGTCAATGAGCCTACCGGGTCAGAGACAGCTGAACATGATTCAGAGAGCTTGAGAATGCATCAATTTTATGCTGCTGTATCTGATGTTAAGTGTCGTTGCGCTGTCCAACTCTTGTTAATCCAGGCTATTATGGAGGTCTACACAATGTACAGGACTCGGATATCTATGAGAAACGTGTGTGTTCTATTTGATGCTTTGCGTACAGTGGCATCACATGCACATAAGATAAACATTGATGCCAAGCTGTGTTCAAAGCTACAGGAGCTTGGGTCCGTTACCCAAATGCAAGACCCTCCACTACTACGTCTTGAAAATGAGTCCTACCAGACGTGCCTCACACTGCTACAAAACCTTTTGCTGGATCGACCTCTAAACTTCAACGAGGAGGAAGTGGAATCCTACCTTGTTGAGCTTTGCCGAGAAGTGCTTCAATTCTATATAGACTCTTCTTCTGGGCAAGGAGTTGAATCAACCCGTGTCAATCAGCCCCACTGGAGCATTCCCTTGGGTTCCAGAAGACGTAGAGAGTTGACTGCGCGTGCACCTCTTATTGTGGCAACTCTGCAGGCTATACGTAGTTTGGCCGATACTTCATTTGAGAGAAACTTGTCACTCTTCTTCCCTTTGCTTTCAACCTTGATCAGTTGCGAACATGGGTCAAAGGATGTCCAGGTAGCATTGAGTGAAATGCTCAGCGTATCAGTTGGTCCAGTGCTGCTGCGATCCTGTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_13239.p1 GENE.S_Transcript_13239~~S_Transcript_13239.p1 ORF type:complete len:1793 (+),score=332.37,Sec7|PF01369.16|1.4e-69,Sec7|PF01369.16|7.7e+03,Sec7|PF01369.16|7.3e+03,Sec7_N|PF12783.3|1.3e-44,Sec7_N|PF12783.3|7.7e+03,Sec7_N|PF12783.3|2.9e+03,Sec7_N|PF12783.3|7.9e+02,Sec7_N|PF12783.3|1.7e+02,DCB|PF16213.1|4.4e-41,DCB|PF16213.1|1.1e+03,DUF1981|PF09324.6|2.3e+02,DUF1981|PF09324.6|4.7e+03,DUF1981|PF09324.6|9e+02,DUF1981|PF09324.6|67,DUF1981|PF09324.6|8.6e-32,Mon2_C|PF16206.1|4.7e-11 S_Transcript_13239:393-5771(+)
MASSEADSRLKLVLAPSLEKIIKNGSWRKNSKLVHECKSLLEKLNSNPHSLSSPDSPTSESGAPGPVHDGGAHEYSMSDSDVILSPFINACCSGNVKIADAGLDCIQKLIAHGYLRGEADLAGSNPESKLLNRVIDSVCKCSEINDENIELNVLKTLLSAVTSTSLRIHGDCLLQIVRTCYDIYLGSKNVVNQTTAKASLIQMLVIVFRRMEADSSTVPVQPIVVAELMEPPEKSDADPGMTQFVQGFITRIMQDIDGVLNPVALPEKGGGGAAVHDGAFETRINATVEGTNPADLLDSTDKDMLDAKYWEISMYKSALEGRKGELADGEEGAAAAVAGMVERDDDLEVQIGNKLRRDAFLVFRALCKLSMKTPPKEALQDPQLMRGKIVALELLKILLENAGAIFRTSDRFLGAIKQYLCLSLLKNSASTLMIVFQLSCSIFMSLVARFRAGLKAEIGVFFPMIVLRVLENVAQPNFQQKMIVLRFLEKLCEDSQILVDIFINYDCDVNSSNIFERMVNGLLKTAQGVPPGVTTTLLPPQEVTLKFEAMKSLVAVLKSMGDWMNRQLRIPDPHSAKRYEPAENSPEVGSPHLANGNGDEASEGSDVPSESSNDISDVQTIEQRRAYKLELQEGISLFNRKPKKGIEFLINANKVGSSPEEIATFLKDASGLNKTLIGDYLGEREEMSLKVMHSYVDSFDFQGKQLDEAIRVFLQGFRLPGEAQKIDRIMEKFAERYWKCNPKAFSSADTAYVLAYSVIMLNTDAHNPMVKNKMSAEDFIRNNRGIDDGKDLPEEYMRSLYERITKNEIKMKEDDLAVQQKQSINSNKILGLDSILNIVIRKRGEEMETSDDLIRHMQEQFKEKARKSESAYYAATDVVILRFMIEVCWAPMLAAFSVPLDQSDDEVIISLCLEGFRSAIHVTSVMSMKTHRDAFVTSLAKFTSLHSPADIQQKNIYAIKAIVTIADEDGNYLQEAWEHILTCVSRFEHLHLLGEGAPPDATFFAIPQSDQEKSRQAKSNILPLLKKKGAGKIQYAAAAVRRGSYDSAGIGGNASVTSEQMNNLVSNLNMLEQVGSAEMNRIFTRSQKLNSEAIIDFVKALCKVSIDELRSASDPRVFSLTKIVEIAHYNMNRIRLVWSSIWHVLADFFVAIGCSENLSIAIFAMDSLRQLSMKFLEREELANYNFQNEFMKPFVVVMRKSSAVEIRELIIRCVSQMVLSRVNNVKSGWKSMFMVFTTAAYDDHKNIVLLAFEIMEKIVRDYFPYITETETTTFTDCVNCLIAFTNSRFNKDISLSAIGFLRYCAEKLAEGDLGSSGKSKDKETSGNLSPSSPQTTKDGKLENGELNDKEDHLYFWFPLLAGLSELSFDPRPEIRKSALQILFDTLRNYGQHFSLPLWEKVFESVLFRIFDYVRHAVDPSMENPSGESSDSEIAEFDQDSWLYETCTSSLELIVDLFVKFYSTVNPLLKKVLMLLVSFIKRPHQSLAGIGIAALVRLISNAGDLFVDDKWLEVVSSLKEAATSTLPDFSFIFDGDSLVRSSEESVSRQGVNEPTGSETAEHDSESLRMHQFYAAVSDVKCRCAVQLLLIQAIMEVYTMYRTRISMRNVCVLFDALRTVASHAHKINIDAKLCSKLQELGSVTQMQDPPLLRLENESYQTCLTLLQNLLLDRPLNFNEEEVESYLVELCREVLQFYIDSSSGQGVESTRVNQPHWSIPLGSRRRRELTARAPLIVATLQAIRSLADTSFERNLSLFFPLLSTLISCEHGSKDVQVALSEMLSVSVGPVLLRSC*

Click here to download the sequence:
Link to NCBI Protein BLAST