Transcript Information: S_Transcript_132445.p1


Annotated TAIR IDAT1G19980.1
Annotated Gene Namecytomatrix protein-related
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:6933162-6934643 | Forward length=342
E-Value1.4E-55
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.6841313185314
Replicate 21.8084253735668
Replicate 32.1835662029764
Condition 2: 8 Hour
Replicate 12.4083318755232
Replicate 22.0375089835817
Replicate 32.4460808727028
Condition 3: 24 Hour
Replicate 11.9099351685765
Replicate 22.1466633915666
Replicate 32.8024493783462


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_132445.p1 GENE.S_Transcript_132445~~S_Transcript_132445.p1 ORF type:complete len:549 (+),score=100.71,TMF_DNA_bd|PF12329.4|1.6e+04,TMF_DNA_bd|PF12329.4|1.1e+03,TMF_DNA_bd|PF12329.4|69,TMF_DNA_bd|PF12329.4|0.00023,TMF_DNA_bd|PF12329.4|0.025,TMF_DNA_bd|PF12329.4|0.37 S_Transcript_132445:95-1648(+)
ATGGGCAGTGTAAAGAAGAAACGCAGTCAAATCTCATCTGACCGAGCGAAATGGGAAGTAATATTTAAAGCTCTCAAGCTCACTTTACTCAAACAGAAATCCCAAATCGAATCTCTTCTTGAACAGCGTAATCTTCTAGAACTACGTCTTCGGAATTTTTATCAACGTTATGTTTCCGATCTTTACCTTGCTGATGACCAAATCTCTCAGTTGGAAAGACAAATTTCCTCGGCTGAGTTGGCGAAATTGGTTGAAACTGCCAAAGCGAATTTGCTTGTGGGGTCCAAGCAAAGGGACGCTCTTGTTTATAAGCTTAAATTAGAACATGCTGAGAATGAATTGAATGATTTTAAAGCCTGGTTTGACATCCTGTCTCATAGATGTTCCAATCAAGAGCACATCTCTCCAAATAAGCTATATGAATGTTTAAAAGCAAAAGATGGGATAGATAACTCTTCTAAAGATTTATCTGTGCATAGTTATAAACCACTAGAAAAGGAAGTGGCCAGGCTAAAACGTGAATATGAGAAGCTCTCTGTGAAAAATAGTTCCGACATATCTGCCCTTCAAGCAGAAATAAGCTTTGTCTGGAATCAATACAAAGAAATGGAGAGCAACTACACTAATCAACTGCAGACTAAGCATCACGAAATCAGTCAAACAAATGAGAAGGTCGCGGAACTCCTGGCTGGTATGGAGCAATTGCAGTCATCAAATGCAGAAAAGGATGCCACAGTTGTGAGTCTAAGAGACAATATAACTAAGTTGGAGAGCATGACAAATGAAAAAGATGGAGAAATCTCCAGACTGACCAAAGAATTAGAGTTGTTAAGAGCTATAACTACTGCTGGCCTACCGGTGTTAAAGAACTGCTCAAATGAACCGCCATCATCTAGCTTGACAGGCAGCAGGAAGAGCAGATTGAGGAGGAGTGCAGCTCAGGAGGAAAAAACTTATCCTATGCAGCTGGAGGCTGCAGTTGCAAGTCTAAGAGCCAAAATCACTGAGGTGGAGGCTGAGTCAAATAAAAAAGATGGAGAGATCTCCAGACTGACCAAAGAATTAGAGTCGTTCAGAGCTATAACTACTGCTGGGCTACCGGTTTTAAAGAATTTCGCAAACAAACCATCATCATCTAGCTTGACAGGCAGCAGGAAGAGCAGAACTAGGAGTGCAGCTCAGGAGGAAGAAACTTCTCCTAAGGAGCCGGAGGCTACAGTTGCAACTCTAAGAGCCAAAATTACTGAGTTGGAGTCTGAGACAAACAGCAAAAATGGAGAAATCCTCACATTGTCAAAGGAATTGCAGTTGTTAAGATCAAAAACTGCTGCTGATACTCCTGCTTTAAAACGTTGCACAGGCGAGCCTTCAGATTCTAGGACAAGAGGCAGAGGGAATGGCAGTAATAAAAGGAAATTAGCATCTTCTGCGGAGCTGGTCATAGAGCAAGGCAGAAGAGGCTCGAGAAAACAAGCAAAAGTTGTCACAAACGAGACTCCAAAGTTATTCACATCCCAGTTCAGAGTACCAATATTGAAGAGCCAATCTCCATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_132445.p1 GENE.S_Transcript_132445~~S_Transcript_132445.p1 ORF type:complete len:549 (+),score=100.71,TMF_DNA_bd|PF12329.4|1.6e+04,TMF_DNA_bd|PF12329.4|1.1e+03,TMF_DNA_bd|PF12329.4|69,TMF_DNA_bd|PF12329.4|0.00023,TMF_DNA_bd|PF12329.4|0.025,TMF_DNA_bd|PF12329.4|0.37 S_Transcript_132445:95-1648(+)
MGSVKKKRSQISSDRAKWEVIFKALKLTLLKQKSQIESLLEQRNLLELRLRNFYQRYVSDLYLADDQISQLERQISSAELAKLVETAKANLLVGSKQRDALVYKLKLEHAENELNDFKAWFDILSHRCSNQEHISPNKLYECLKAKDGIDNSSKDLSVHSYKPLEKEVARLKREYEKLSVKNSSDISALQAEISFVWNQYKEMESNYTNQLQTKHHEISQTNEKVAELLAGMEQLQSSNAEKDATVVSLRDNITKLESMTNEKDGEISRLTKELELLRAITTAGLPVLKNCSNEPPSSSLTGSRKSRLRRSAAQEEKTYPMQLEAAVASLRAKITEVEAESNKKDGEISRLTKELESFRAITTAGLPVLKNFANKPSSSSLTGSRKSRTRSAAQEEETSPKEPEATVATLRAKITELESETNSKNGEILTLSKELQLLRSKTAADTPALKRCTGEPSDSRTRGRGNGSNKRKLASSAELVIEQGRRGSRKQAKVVTNETPKLFTSQFRVPILKSQSP*

Click here to download the sequence:
Link to NCBI Protein BLAST