Transcript Information: S_Transcript_132467.p1


Annotated TAIR IDAT5G12080.1
Annotated Gene Namemechanosensitive channel of small conductance-like 10
Annotated Gene Symbol(s)MSL10, ATMSL10
Annotation TypeHomolog
Chromosome Positionchr5:3898182-3900923 | Reverse length=734
E-Value3E-23
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.6937550030732
Replicate 22.0717497511325
Replicate 32.0916761655791
Condition 2: 8 Hour
Replicate 13.5368940038172
Replicate 23.6558874606383
Replicate 33.7172758628199
Condition 3: 24 Hour
Replicate 13.1435320145001
Replicate 22.2111035684241
Replicate 33.2911692089603


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_132467.p1 GENE.S_Transcript_132467~~S_Transcript_132467.p1 ORF type:complete len:820 (+),score=98.06,MS_channel|PF00924.14|2.3e-09 S_Transcript_132467:960-3419(+)
ATGGAGGATGAGGTCCAGCTAGACAGGCCCTTCATCGTCAGGGTCGAGGAAGAGGAGGAGAAGGAGAAGGGCCCGAATGGCAGCACTTCCAGCACTACTCTTGCTGAAAATCCTGCAGACAAAATTACTACAGACACTGATACTAATAATAACAGTAGTATTAGTCGTAGGTTTGTAATTCCTAAATGGATAAGAAAAGGTGTTACCAATGTGATGAAAATTGTGGGGGTTGTCCTGTTTTTCTGTCTCCTCATCACAGGTACTGTCGCAACGGCCTTGATTTGTCGGGTGATCAACATAATCATACACATAATCAACTCAACGAAGGGTGATGGAGGCGGAAGGAAGGTGGTCAGTCCAATCTCAAATGGGGCTTCTACTTCAATCCTGCTGCTTGTGATCATCTTATTAGGTGCACTCCTAAATGTTCCTGAGTGGCAGCATAACACCCTTTGTGGACTGCAAATTGTCAAATGGATTCAAGTTTTCATCATAATTCTGGGCTACTTGTGTATTGGGACGAGCACTGAGTTTACGATATCCAGTTGCAAAGAGTCCAATGATGTAGAGTTTGTCGAAGATCCCTGGTTTTGGTGGCTGCTCGAGGTGATCAACTTCGCCCTTCTGTTGCCTGTGGGGGCATTAATTATGAAGGTGACTCCCACCTGGAGACATGGTAGGAAGTGGATCTACGCAGTGATTCTTGTCATCCTTGCCCAGAATGTCATCAGCCTAGCGGGTCACTTAATGGTGAGATATTTTAAGAAGGCCTTGTGCTCGCGAGCTGCTGGCAAAAGATGTAAGGGCGCAAACTGCGGCTTTTATCTAATGCAAGGTCTGAGAAGAAGCATTACCTTCATAGTTGTGGCGTTGTTGCATCTCCTTGTTTGGATTTTCTATTTATGCCCTACCTTAACATTGGCTGGCAAAGTTGTGGATTTTGGTACTTGGATTTTTCTTTGCGAGCTTCTGTTTGGAGCGCTCTGGATAATCAAGGATTTCATACTAATCTCGTGGAAGGCTCACGCACTTTATGACAAAAGACTAATGAGAAAACTGTCTCAGTGGTATTGCCTCGATTCTCTTGGTCTTATCTCGTTGAGGAACAGGAATGGGACTCTACATGCTGATCAACCATCTGCATCTTCAGATAATAATGTATCGTCAGCATTGGATTTTGTTTTCGAGTTCTTTCCATCTACTCCTACTATATTTGTCAATCCTCTAGAGGTGCACAAAAACACAGAATGGAACAGAACGATCAAGGAGTGGAGAGAAGCCAAAGGAAAATTAGTCCAACTTGTACTCCAAGCACAAGGGGCTGATGGTCCTGTTTTGTCAATACATGATAAGGAAACAGTTGCTCAGGCTTTTCTACCTCCAGGCTGTACATCATTGCCAAATGATAATGATATATCAGAATTTTGCGAAAAATGGAGGTATATATATGGGTTCCATGAAGATGATACTGATAGCACTATGAGCAAGACTAGCAAGGAAGTGCTCGAGGATCATTCTATTAGAAACGAGGCAGAGTTAGAGGAAACCATTAGTCCATTGTGCAAAATAGAGGATGATTCAGTAGACAAGATTCTGTATAAGCAGTTTGCCAAGATTCTGTATAAGCAACTTGAGGAGACTAACCAGACAAAACGCGGAGTTGATGCCAAAGATTTCCTACCATGGATGGAAAGAGCATACCAAAATTGTATGCAATTACATGGGTTCCTAGCTGGTGGTCGAGATGTTGTGAATTTCTTGAACTGGCTGATGCTTGTGTTCATAATTACGTTAGTTGTTATCATTTGGCTACGCCTCAACCAAATCTTAACAACCAAAGTAACTGTGGCCCTTACATCCCCAATATTACCTCTGACTTTTATTTTTGGAGACACTCTCAAAACTATGTTTCAAGGATTCTTATTCGCCTACATCACTCATCCTTTTGCTATTGGTGATGTTTGTGTGATCAATCGGACTCAGTTAAAGGTCAGAGATATTGGCATTTGGAGGACAACATTCTCAAAGCTTGATACAGAAGATCATGAAGTTGTGTACCCAAATGCTGCTCTAACCAATAGTGCCATTATAAGTTACGAGGGCGGCACAATTAATCTGAATGATTCTGTGGAGTTCACTTTACATCCTGCTATGGACATAAAATCCTTAGAAGGCTCCATTAGAAGATATTTTTTAACAGGTTCGGTGGAGGAGGATACTCAACAAGGTGCACACAGTCAACCGGGCTCAGAGAACAATACTCATGATGATGTAGAAGTCGACGTGGTTGTACAACAGATTCCAGACAATATCAAGATGACAGTCCACTTCAAGCATGACAATATCATTCTTGATATGACAAGCAAACAAGCTTCAATCAGTAAAATCAAAAGAAAATCAGAAATTCTTGAGAATTTACTTGAGCTTGTATTAAAATTAGAGCAAACTCTCATAGTATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_132467.p1 GENE.S_Transcript_132467~~S_Transcript_132467.p1 ORF type:complete len:820 (+),score=98.06,MS_channel|PF00924.14|2.3e-09 S_Transcript_132467:960-3419(+)
MEDEVQLDRPFIVRVEEEEEKEKGPNGSTSSTTLAENPADKITTDTDTNNNSSISRRFVIPKWIRKGVTNVMKIVGVVLFFCLLITGTVATALICRVINIIIHIINSTKGDGGGRKVVSPISNGASTSILLLVIILLGALLNVPEWQHNTLCGLQIVKWIQVFIIILGYLCIGTSTEFTISSCKESNDVEFVEDPWFWWLLEVINFALLLPVGALIMKVTPTWRHGRKWIYAVILVILAQNVISLAGHLMVRYFKKALCSRAAGKRCKGANCGFYLMQGLRRSITFIVVALLHLLVWIFYLCPTLTLAGKVVDFGTWIFLCELLFGALWIIKDFILISWKAHALYDKRLMRKLSQWYCLDSLGLISLRNRNGTLHADQPSASSDNNVSSALDFVFEFFPSTPTIFVNPLEVHKNTEWNRTIKEWREAKGKLVQLVLQAQGADGPVLSIHDKETVAQAFLPPGCTSLPNDNDISEFCEKWRYIYGFHEDDTDSTMSKTSKEVLEDHSIRNEAELEETISPLCKIEDDSVDKILYKQFAKILYKQLEETNQTKRGVDAKDFLPWMERAYQNCMQLHGFLAGGRDVVNFLNWLMLVFIITLVVIIWLRLNQILTTKVTVALTSPILPLTFIFGDTLKTMFQGFLFAYITHPFAIGDVCVINRTQLKVRDIGIWRTTFSKLDTEDHEVVYPNAALTNSAIISYEGGTINLNDSVEFTLHPAMDIKSLEGSIRRYFLTGSVEEDTQQGAHSQPGSENNTHDDVEVDVVVQQIPDNIKMTVHFKHDNIILDMTSKQASISKIKRKSEILENLLELVLKLEQTLIV*

Click here to download the sequence:
Link to NCBI Protein BLAST