Transcript Information: S_Transcript_132649.p1


Annotated TAIR IDAT5G43470.1
Annotated Gene NameDisease resistance protein (CC-NBS-LRR class) family
Annotated Gene Symbol(s)RPP8, HRT, RCY1
Annotation TypeHomolog
Chromosome Positionchr5:17463130-17466658 | Reverse length=908
E-Value2E-44
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.7202944612315
Replicate 22.9616306179423
Replicate 33.3614839167154
Condition 2: 8 Hour
Replicate 13.5980030461173
Replicate 23.7745606695105
Replicate 33.0976231741229
Condition 3: 24 Hour
Replicate 12.0176924406337
Replicate 22.3445322320359
Replicate 31.863697862447


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_132649.p1 GENE.S_Transcript_132649~~S_Transcript_132649.p1 ORF type:complete len:812 (+),score=148.15,NB-ARC|PF00931.18|4.8e-43 S_Transcript_132649:367-2802(+)
ATGGCCAACAAGGATGCTTCCTTGGCTGTAGACAATACCATTCAGCACCTAGAACAAGAGGCTGAGACACTTCAAGAGGTGAATAAACTAAAACCCCTTCAGTCGGGGCTCAGGAATATGAGCCTGTCACTTAGGGACTTTGATGGGCAGGAAGAGAGTCATCCAGAAACAGCTAAATGGTTTCGCCAAGTCAGAGACACTGCTTATGAGGCACATAATGCTGTTGATTCTCTTGTGGTCGTCTGCAAGTTGCAGAAGCATAAGAATAAGTTTAAAAGGTTGCTTTCAGGAAAAAGATCCATCAAACAATGCATCCAAGAGATTGATGGTGTTGCAAAGCGTATCCAGAAAATTCCATCCTCCAAGAACTATGTTAGAACCAATCCTGTGTTAGATGATACAGTGGGATTTGAAGAAATCAGAGACGCTCTGGTCAGCCAGCTTACTAGGGGGGGATTACAGCGCGATGTCGTATTGATCTATGGAGAGAAAGGCTTGGGCAAAACAACTCTTGCCAAGATGGTTTACAATGACGCTACAGTTAACCATCAGTTTCCCCGCAGAGAGTGGGTGAATGTGCCACAGGACTTCCCACTGGGAAACTCATTGTGGAGAATTTTCATTCAGATCATGCCATCAAGTTCAGAGACTGAACGCAACATGAATGAGGCCTCCTTGAAGGCAAAGTTCGTTGAAAGCATGAAAGGCAACAAGTATCTCATTGTGATGGACAACATGTCTGAAAGCAAGGGACATGATGCACTTATATCCTTATTTCCAGATGAATCAAATGGAAGTCGGATATTGTTAACAAGCACACTTACACCGGAGGCATTGCATGTCAAAAAAAGTCTTTCACATGAGATGGGTCCTCTGGACATTAGCAAGAGTTGGGAGCTTTTGTCAAAGAAAGTTTTTGGCGAGGCAAATTATCCCTTAGTCCTGGAGGAACTTGGGAAAAAAATGGTGAAAATATGTAACGGCTCTCCAAAGGCAATTGTGTCTCTGGCAGCAACCTTGAATCAAACAAAGAAAACAGAACAAATGTGGTCGAAATTTCTTGAAGATCTAGCTCATGGGGTCAACCTTGCCAGCTATCTGGACCTTCCTGCCAAAGGAGGACTAGAGAGATGCCTATTGTACTTCAGTATGTCATGTGACGATTTGAATATAAGTGCGAAGAAAATGATCCAAATGTGGGCAGCTGAAGGGCTTCTGAATCGAAGGAGCAGCGAAAGACCAGAAGAAATTGGGGAAGACTACTTGAAGAAACTCATCAATAGTTGTTTCATCGAAGAAGTTGGTGCAGAAAGAGGAGATGGACACATGAAAACATGCCGTGTCAACACTGCAGTTTGGATTCAAAACTATGTCAACAATCTTACGAAATCTGATGATGGAGTCCACAAGTTTCTGGACGATAAAACAGACAACACTCCCATTGAAAAGGGCATAAGATGGTTGGGAATCCATAATGACTCATTCATGGTCGTTTTAAAAGGGTTTGAGAATGGCTCGCGTGTCAGTTCTCTTCATTGCTTTGGTAAGAATAATAAACCTATATCATCTGCGGCCCTTTGGGCAGCTTTACACCATAAGTTTCCCAATCTTAAGGTGTTAAATTTGGAGTCTCTAGTGCTGGAAAATGTGCCCAAACATCTAGGAAAACTTGTTCATTTAAGGTATTTGAGGTTGCGAACTCCTAGTGTCACACACCTTCCTACTTGTGTTAGTAGCCTTTCCTTTCTGGAGACACTAGACATGAGGGAATCTCGTTTACACAGCATGCCTCCTGAAATATGGAAGATGGAGCGTCTCCGCCATATTTATCTTGGTGGCTTCACAATGCCAGACGCTAGAGGCTTATACTACTACAAAAACCTGTGGAACCTCCAAAGTCTTTCAGGGGTGCACCCTGACAAGGTTTTGAAGAGGCTAATGGTGAAAGCCAAGTTCCCTAATGTCACCAAATTGAGAATATGCACCAAGGAAACAAAAGTGGCAACCCAATTTCTCAATAGCATTGACCACTTGTACCATCTTCAATCCCTAAGGGTGGAGAGTCCCACCAAACTTCCAGATCCAAATGCGTTTCCCCTGAGCCTAACGAAACTGACCCTCCTTGAGACCAAACTCCAGCCACAGTGTATGAAGACAGTAGAAAAGCTCCCAAACCTAAGGAAACTAAAATTATTGAAGGATTCCATCAGTGGAGAAGAGATTGTGTGTGATGCAGGCGGATTGCCACAACTCCAAGTGTTGTTCTTAATAAATTTGGTTCTGGAGAAGCTGACACGGGGTAAAGGGGCTATGCGATATCTCAAGCATTTGTTCATCGGTGAATCTGTAAACAAGGAGAAACTTCCAGATGATTTAAGGCAGATGGCTAAGGAAGTGCAACCAGATGAGAGTTGTTTGAAGGCAACTTCAAAGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_132649.p1 GENE.S_Transcript_132649~~S_Transcript_132649.p1 ORF type:complete len:812 (+),score=148.15,NB-ARC|PF00931.18|4.8e-43 S_Transcript_132649:367-2802(+)
MANKDASLAVDNTIQHLEQEAETLQEVNKLKPLQSGLRNMSLSLRDFDGQEESHPETAKWFRQVRDTAYEAHNAVDSLVVVCKLQKHKNKFKRLLSGKRSIKQCIQEIDGVAKRIQKIPSSKNYVRTNPVLDDTVGFEEIRDALVSQLTRGGLQRDVVLIYGEKGLGKTTLAKMVYNDATVNHQFPRREWVNVPQDFPLGNSLWRIFIQIMPSSSETERNMNEASLKAKFVESMKGNKYLIVMDNMSESKGHDALISLFPDESNGSRILLTSTLTPEALHVKKSLSHEMGPLDISKSWELLSKKVFGEANYPLVLEELGKKMVKICNGSPKAIVSLAATLNQTKKTEQMWSKFLEDLAHGVNLASYLDLPAKGGLERCLLYFSMSCDDLNISAKKMIQMWAAEGLLNRRSSERPEEIGEDYLKKLINSCFIEEVGAERGDGHMKTCRVNTAVWIQNYVNNLTKSDDGVHKFLDDKTDNTPIEKGIRWLGIHNDSFMVVLKGFENGSRVSSLHCFGKNNKPISSAALWAALHHKFPNLKVLNLESLVLENVPKHLGKLVHLRYLRLRTPSVTHLPTCVSSLSFLETLDMRESRLHSMPPEIWKMERLRHIYLGGFTMPDARGLYYYKNLWNLQSLSGVHPDKVLKRLMVKAKFPNVTKLRICTKETKVATQFLNSIDHLYHLQSLRVESPTKLPDPNAFPLSLTKLTLLETKLQPQCMKTVEKLPNLRKLKLLKDSISGEEIVCDAGGLPQLQVLFLINLVLEKLTRGKGAMRYLKHLFIGESVNKEKLPDDLRQMAKEVQPDESCLKATSK*

Click here to download the sequence:
Link to NCBI Protein BLAST