Transcript Information: S_Transcript_132678.p1


Annotated TAIR IDAT5G12010.1
Annotated Gene Nameunknown protein; INVOLVED IN: response to salt stress; LOCATED IN: chloroplast, plasma membrane, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G29780.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:3877975-3879483 | Reverse length=502
E-Value8.2E-236
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.6947627469365
Replicate 25.1938558918093
Replicate 33.9705689355035
Condition 2: 8 Hour
Replicate 16.092968662038
Replicate 26.7520669938813
Replicate 35.961575084693
Condition 3: 24 Hour
Replicate 13.4283720568739
Replicate 23.6480984428728
Replicate 34.0091378430667


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_132678.p1 GENE.S_Transcript_132678~~S_Transcript_132678.p1 ORF type:complete len:497 (+),score=129.39,DDE_Tnp_4|PF13359.2|4.5e-40 S_Transcript_132678:294-1784(+)
ATGAACAATACTAGCAGTAACAATCATCACAGTAATGGGGGTGGTGGTAGGAAAAGAAGGAAGAAAGATGATAATTGTGAGGAAAAGCAAGAACCCAATAAGGGTTTTAAAGAGATGATTACATCCTTCTTATTGTTAGAAGACCAAGAAAAGATTGATAAACAAGAGTGGGAAAAGATTGCCCACCAAGAAAGATCCAATTTGGAAGCCAACCATAAGAAGAAAACACAGGTTATGTTGGATTATTACTCCAGTGTGCAGGATTACTATGAGGATTTGAATGAAAGTGATAGAGCAAGGAGAAAGAGATCAAGGGCAGCTGTTAATTCTGTTGTTTCTGTTACTGCAGGTGCTGCTGAGATTTCTGACAAAAGCTGTAATCCTGATACTGCTAACAGTAAATCTTCTGGTGGTTCATCAGCTAATCATCAGAGAAGATTGTGGGTTAAAGATAGGTCTAAGGCATGGTGGGATGAGTGTAATAGTCCTGAATTTCCTGAGGAGGAGTTCAAGAAATGGTTTAGGATGGGGAAATCCACATTCGAGTCGATTTGTGATGAACTTAATTCAGTTGTTGCTAAGGAAGATACTATGTTAAGGGCTGCAATTCCTGTTAAACAAAGGGTAGCTGTGTGTATATATAGGTTAGCAACTGGTGAGCCACTTAGGTTAGTGTCTAAGAGATTTGGGTTGGGTATATCAACTTGTCATAAGCTTGTTCTTGAGGTTTGTGCTGCAATTAGGACTGTTTTGATGCCTAGATATTTGCAATGGCCAGATGAGGAATCAGCTAAGAGGATTAAGGAGGAGTTTGAGTCAGTTTCAGGGATTCCCAATGTAGTTGGTTCTATGTATACAACACATATACCTATTATTGCTCCTAAGATTAGTGTGGCTGCTTATTTCAATAAGCGCCATACCGAGAGAAATCAGAAAACGTCTTACTCGATTACAGTTCAAGGTGTGGTTGATCCTAAAGGGGTGTTCACTGATGTTTGTATCGGGTGGCCTGGTTCAATGCCTGATGATAAGGTGTTGGAGAAATCAGCATTGTATCAGAGGGGTGTTCAAGGCAATTTGAAGGGTGTTTGGATTGTTGGGAGTTCTGGTTATCCCTTAATGGATTGGGTTTTAGTGCCCTATACTAATCAGAATCTTACTTGGACACAACATGCTTTTAATGAGAAGATTGGGGAGATTCAGAAGGTTGGTAAGGATGCCTTTGCAAGGTTGAAAGGGAGATGGTGTTGCTTGCAAAAGCGAACCGAGGTGAAACTTCAGGAATTGCCTGTAGTTCTTGGTGCTTGCTGTGTTCTACATAATATATGTGAAATTAGAGAGGAAGAGATGGATCCTGGGCTGAATTTTGATCTCTTTGATGATGAGATGATCCCAGAGATTCCTTTGCAATCTATAAGCTCTCTAAAGACTAGAGATGCAATTGCCCATAATCTTTTGCATCATGGCCTTGCTGGCACTGGCTTTTTGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_132678.p1 GENE.S_Transcript_132678~~S_Transcript_132678.p1 ORF type:complete len:497 (+),score=129.39,DDE_Tnp_4|PF13359.2|4.5e-40 S_Transcript_132678:294-1784(+)
MNNTSSNNHHSNGGGGRKRRKKDDNCEEKQEPNKGFKEMITSFLLLEDQEKIDKQEWEKIAHQERSNLEANHKKKTQVMLDYYSSVQDYYEDLNESDRARRKRSRAAVNSVVSVTAGAAEISDKSCNPDTANSKSSGGSSANHQRRLWVKDRSKAWWDECNSPEFPEEEFKKWFRMGKSTFESICDELNSVVAKEDTMLRAAIPVKQRVAVCIYRLATGEPLRLVSKRFGLGISTCHKLVLEVCAAIRTVLMPRYLQWPDEESAKRIKEEFESVSGIPNVVGSMYTTHIPIIAPKISVAAYFNKRHTERNQKTSYSITVQGVVDPKGVFTDVCIGWPGSMPDDKVLEKSALYQRGVQGNLKGVWIVGSSGYPLMDWVLVPYTNQNLTWTQHAFNEKIGEIQKVGKDAFARLKGRWCCLQKRTEVKLQELPVVLGACCVLHNICEIREEEMDPGLNFDLFDDEMIPEIPLQSISSLKTRDAIAHNLLHHGLAGTGFL*

Click here to download the sequence:
Link to NCBI Protein BLAST