Transcript Information: S_Transcript_13276.p1


Annotated TAIR IDAT5G14250.1
Annotated Gene NameProteasome component (PCI) domain protein
Annotated Gene Symbol(s)COP13, CSN3, FUS11
Annotation TypeHomolog
Chromosome Positionchr5:4597970-4600561 | Forward length=429
E-Value3E-110
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 111.541352576481
Replicate 213.11385195638
Replicate 312.797000547804
Condition 2: 8 Hour
Replicate 114.96041412554
Replicate 215.123826248795
Replicate 313.268027590856
Condition 3: 24 Hour
Replicate 115.88212192556
Replicate 210.927194867168
Replicate 312.611022202558


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_13276.p1 GENE.S_Transcript_13276~~S_Transcript_13276.p1 ORF type:complete len:392 (+),score=47.24,PCI|PF01399.23|5.2e+03,PCI|PF01399.23|7.3e+03,PCI|PF01399.23|2.8e-10 S_Transcript_13276:111-1178(+)
ATGGACGCGGTGGAGAAAATAGTGGCGCAAATTCAAGGGCTGTCGGGGAGTACGGCGGACCTAAACCAACTCAACCACATCCTCCGACAATCCGAAGATTCTCTTCGATCAAACAATTCTCGCTTACCTACTTTCCTAGATCAACTTGACCCTTCCCTTCACTCTCTCGGCTTTCTCTACTTCTTGGATGCATATACATCTTCCCGACTATCAAGGGATCAAGCACATGAACTTGTTTCATTAGTGGCCAGATTTATTAATTCTTGCAGTGCAGAGCAGATCCGTCTTGCACATGATAAATTTATATGTCTCTGCAAAAGGTACAAGGAGCAAGTTATGGCGCTGGAAGCTCCCATCATGGGTGTTGCTCCAATGCTGACAGCTATCCGTAAAATTCAGCCTTCTACTGAGCACTTAACTACTTTGCATCCCGACTTTCTTCTTCTTTGTATATTAGCAAAGTGCTACAAAACTGGTCTCTGTTTGCTTGCGGAGGATGTATTTGAGGTTGACCAGCCAAAAGATCTTTTTCTTTACTGTTACTATGGGGGGATGATATGCATTGGCCTTAAAAAGTTTGGGAAGGCACTGGAGCTTCTTCACAATGTTGTCACTGCTCCGATGAGTAGCTTAAACGCAATAGCTGTTGAAGCATACAAGAAGTATATATTGGTCTCACTCATTCACAATGGACAGTTCTCAACTCATTTTCCCAAGTACACTTCTTCAGTGGCGCAGAGGAGCTTGAAGAATTTCACTCAGTCCTACATTGAACTAGCAAATAGTTACAGCAGCGGGAATATTGCTGAGCTTGAGACGTTTGTCCAGACTAACCTGGAGAAGTTTGGAGGGGACAACAATCTGGGATTAGTGAAGCAGGTTGTGTCATCTATGTATAAGCGGAATATTCAGAGGTTGACTCAGACATACTTAACTTTATCCCTTGAGGATATAGCTAATACAGTGCGATTAAACAGCCCCAAGGAAGCAGAGATTCATGTACTTCAAATGGAACTTGATACATATCATATGTTTGCTAACTGTGGTGAACTGGTGTCCCATCTCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_13276.p1 GENE.S_Transcript_13276~~S_Transcript_13276.p1 ORF type:complete len:392 (+),score=47.24,PCI|PF01399.23|5.2e+03,PCI|PF01399.23|7.3e+03,PCI|PF01399.23|2.8e-10 S_Transcript_13276:111-1178(+)
MDAVEKIVAQIQGLSGSTADLNQLNHILRQSEDSLRSNNSRLPTFLDQLDPSLHSLGFLYFLDAYTSSRLSRDQAHELVSLVARFINSCSAEQIRLAHDKFICLCKRYKEQVMALEAPIMGVAPMLTAIRKIQPSTEHLTTLHPDFLLLCILAKCYKTGLCLLAEDVFEVDQPKDLFLYCYYGGMICIGLKKFGKALELLHNVVTAPMSSLNAIAVEAYKKYILVSLIHNGQFSTHFPKYTSSVAQRSLKNFTQSYIELANSYSSGNIAELETFVQTNLEKFGGDNNLGLVKQVVSSMYKRNIQRLTQTYLTLSLEDIANTVRLNSPKEAEIHVLQMELDTYHMFANCGELVSHL*

Click here to download the sequence:
Link to NCBI Protein BLAST