Transcript Information: S_Transcript_132820.p1


Annotated TAIR IDAT3G19360.1
Annotated Gene NameZinc finger (CCCH-type) family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:6707544-6708864 | Forward length=386
E-Value2.1E-91
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.5119743473438
Replicate 24.2477209780273
Replicate 34.0807203403369
Condition 2: 8 Hour
Replicate 15.2700677220501
Replicate 24.5643714178753
Replicate 34.5326802378409
Condition 3: 24 Hour
Replicate 13.326950646556
Replicate 23.7121760340569
Replicate 32.7541312856161


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_132820.p1 GENE.S_Transcript_132820~~S_Transcript_132820.p1 ORF type:complete len:348 (+),score=68.59,zf-CCCH|PF00642.20|2.3e-07,zf-CCCH|PF00642.20|1.9e-06,zf-CCCH|PF00642.20|3e-11,Torus|PF16131.1|0.047,Torus|PF16131.1|0.49,Torus|PF16131.1|1.5 S_Transcript_132820:494-1537(+)
ATGAGTTTCTCTGATGCATCAACACCATTTATGCCATACCCAAATGGGGGTTTAGATTCTATGGGAATGTGGTCACAACAATATTCAATTACAACTACAAATGAACAACCTGAAATAACTAGCCAATTTGACCCTCATGCCCCTCCTCCAATGAAAAGACCCAAGAGTAGTTCTGATGATACCCAAAGTGGTAATCACAATCGAAGAACCCCTCAAAACAACAACCTTCCTGTGAATCAGCCCATTGGAAAGATCTTCTTTAAGACGCGATTATGCGCCAAGTTTAGGATGGGTCAATGTAGGAATGGTGAGAATTGTAACTTTGCTCATGGTGAGGAGGACATGAGGAAGCCTCCTCCTAACTGGCAAGAGCTTGTCGCTGGCCGTACGACCGATGATCGAGGGAATGGGATTGGGAATGGGAATTGGGAGGATGATGATAGGTTTATTATTAGAATGAAACTTTGTAAGAAGTATTATAATGGGGAAGAGTGCCCTTACGGTGATAGGTGCAACTTTCTTCATAAGGAGCCTGCGAAGTTCCGTGATGGTCCATCTAGGTTTAGAGACAATTCCAGGGAGAGTTCGGCTATTAGCATTGGCACTACTGGACCTCCTATGGTGCCGCCAAGTGCACCCGATCAGTATGATGTTAATAAGATGGTGAATGGCGGCGTTGATATTTCACGGGGGAACGTGAGGCCTGTTTATTGGAAAACTAGGCTTTGTACCAAGTTTGAGATGACGGGTCAGTGCCAGTATGGTGACAACTGCCATTTTGCTCATGGGCAAGCAGAGTTGATGTTGCCTGGTGGTCGTCCCACTGAAGGCGAGCCAGTAGTTGCGATGTCTGCCCCTCCTAAACCTGCACCTCTACTCGCTAACGAGCCTATTCCAGCTAAGACCGATGCAGGACCTTTAAGCCAAGAAGGTCAAGGGAAGAAGTGTCTCTTGAAGTGGAAAGGGACCAAGAAGATCAACCGCATATATGGGGATTGGATCGATGATTTGCCCCTCAAGTTGCCTAATGAGGTGGAGAGCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_132820.p1 GENE.S_Transcript_132820~~S_Transcript_132820.p1 ORF type:complete len:348 (+),score=68.59,zf-CCCH|PF00642.20|2.3e-07,zf-CCCH|PF00642.20|1.9e-06,zf-CCCH|PF00642.20|3e-11,Torus|PF16131.1|0.047,Torus|PF16131.1|0.49,Torus|PF16131.1|1.5 S_Transcript_132820:494-1537(+)
MSFSDASTPFMPYPNGGLDSMGMWSQQYSITTTNEQPEITSQFDPHAPPPMKRPKSSSDDTQSGNHNRRTPQNNNLPVNQPIGKIFFKTRLCAKFRMGQCRNGENCNFAHGEEDMRKPPPNWQELVAGRTTDDRGNGIGNGNWEDDDRFIIRMKLCKKYYNGEECPYGDRCNFLHKEPAKFRDGPSRFRDNSRESSAISIGTTGPPMVPPSAPDQYDVNKMVNGGVDISRGNVRPVYWKTRLCTKFEMTGQCQYGDNCHFAHGQAELMLPGGRPTEGEPVVAMSAPPKPAPLLANEPIPAKTDAGPLSQEGQGKKCLLKWKGTKKINRIYGDWIDDLPLKLPNEVES*

Click here to download the sequence:
Link to NCBI Protein BLAST