Transcript Information: S_Transcript_133255.p1


Annotated TAIR IDAT5G57940.1
Annotated Gene Namecyclic nucleotide gated channel 5
Annotated Gene Symbol(s)ATCNGC5, CNGC5
Annotation TypeOrtholog
Chromosome Positionchr5:23457116-23460439 | Forward length=717
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 156.92326949203
Replicate 262.212817871947
Replicate 364.689101806302
Condition 2: 8 Hour
Replicate 181.840218686109
Replicate 277.916809842899
Replicate 378.109240742325
Condition 3: 24 Hour
Replicate 175.300244879545
Replicate 259.792559289456
Replicate 367.305042841713


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_133255.p1 GENE.S_Transcript_133255~~S_Transcript_133255.p1 ORF type:complete len:727 (+),score=113.16,Ion_trans|PF00520.27|1.7e-38,cNMP_binding|PF00027.25|1.4e-07 S_Transcript_133255:466-2646(+)
ATGATGTTCAATTGTGGATATGGTCAGAATGATAAATTTGTAAGGTTGGAAGAAGTGTCACTATCTCCCAATTACAATGGAGTGAACAAGGGTCGATTTGGTATTGACGGGCTGAATTGTGCTAATAGCGGAATTAATAGCCCGTCTAACTCTTTTAAGAGAGGAGTGATGAGAAGTTCTGAAGGACTTCGATCAATTGGCAGATCACTTAGATTTGGGGTTTCTAGGGCAGTGTTTCCTGAAGATCTAAAAGTGTCCGAGAAAAAGATTTTCGATCCACAGGACAAATTTCTACAGCTTTGGAACAGACTTTTCTTGGTGTCATGTATTTTGTCAGTTTTTGTGGATCCCTTTTTCTTCTATCTTCCAATTGTTGATCAAGATGTGAAATGTATTGGTATAGACAGAAAGTTGGCAATTGCAGCCACTACAGTGCGGACAATTATCGATGTTTTTTACCTTATCCGTATGGCTATCCAGTTCCGAACTGCATATATTGCTCCATCTTCTCGAGTATTTGGACGAGGTGAACTTGTTATTGATCCTGCACAGATTGCAAAGCGTTACCTACGGAGTCATTTTATCATTGATTTTCTTTCTGTGCTGCCGTTACCACAGATTGTTATCTGGAGATATCTGCAGAGATCAAAAGGATCTGATGTATTTGCTACCAAACAGGCCTTGCTTATCTTAGTCTTGTTTCAATATATCCCCAGGCTTGTCAGGCTCTTACCTCTCACCTCAGAATTAAAGAGGACATCAGGTGTTTTTGCTGAAACTGCTTGGGCTGGTGCTGCTTACTATCTTCTACTCTACATGCTTTGTAGCCATGTAGTAGGGGCTTTGTGGTATCTAATAGGTGTAGAACGTAATGACACTTGTTGGCAGAAAGCTTGTAATCGTTATAAGCAGCAATGCAATAAAAATTTCTTGTATTGTTACAGTCAGAACATGCAAGGCTATGATCGTTGGAAGAGTATACGTGATTCTGTTCTTGATTCAAATTGCACATCGGATGATAATGGACCATTTGACTTTGGCATTTTTCAGCAGGCTTTGCAGGCTGGCATTTCCTCATCTGACAGTTTCATATCAAAATACTGTTACTGTTTGTGGTGGGGACTACAAAACTTGAGTACATTGGGCCAAGGGCTTGAAACAAGTACTTTTCCAGGAGAGGTCATATTCTCCATCGCACTGGCGATATTTGGGCTCATTCTCTTTGCACTTTTGATTGGAAACATGCAGACTTACCTGCAGTCTCTTACTATTCGACTTGAAGAGATGAGGGTCAAAAGGCGTGATTCAGAGCAGTGGATGCATCACCGCTTGCTCCCCCCGGAGTTGAGGGAACGTGTTAGACGCTATGATCAGTACAAATGGCTGGAAACACGTGGAGTTGATGAAGAGAATTTGGTTAGCAGTTTACCAAAGGATCTCAGGAGGGACATAAAACGTCATCTTTGTCTGGCATTAGTGAGGAGGGTTCCTCTGTTTGAAAATATGGATGAGAGGCTACTAGATGCTATATGTGAGCGGCTGAAGCCAAGTTTGTACACTGAAAAGACCTACATCCTACGAGAAGGTGATCCAGTTGATGAAATGCTCTTTATCATACGTGGCCGCCTTGAGAGTGAAACCACTGATGGTGGACGGAGTGGATTTTTGAACCGCAGCTTACTAAAAGAGGGTGACTTCTGTGGAGATGAGCTTTTAACATGGGCATTGGATCCCAGGTCGGGCTCCAACCTTCCATCTTCAACTCGAACAGTAAAAGCAATCACAGAGGTGGAGGCCTTTGCCCTAGAAGCCGAAGAGCTGAAATTTGTGGCGAGCCAATTTAGGCGTCTTCACAGTCGACAGGTTCAACACACCTTCCGATTCTACTCACAGCAATGGCGAACCTGGGCTGCTCGTTTCATCCAAGCTGCTTGGCGTCGGTATTTGAAGAGGAAAATGATGGAGCTCCGTCGGAAGGAGGAGGAGGAAGCAGAAGGAGCCAGTGAGGCCTTGAAAAACACAGGCAGTGGCGGATCATATAGCCTCGGTGCTACCCTCTTGGCGTCAAGGTTTGCTGCAAACGCTCTTCGTGGGGTCCATCGAAATCGGCTTTCCAAGGCTCAGGATTTGGTGAAACTACCTAAACCTCCAGAGCCTGACTTTACAGCTGATGCAGACTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_133255.p1 GENE.S_Transcript_133255~~S_Transcript_133255.p1 ORF type:complete len:727 (+),score=113.16,Ion_trans|PF00520.27|1.7e-38,cNMP_binding|PF00027.25|1.4e-07 S_Transcript_133255:466-2646(+)
MMFNCGYGQNDKFVRLEEVSLSPNYNGVNKGRFGIDGLNCANSGINSPSNSFKRGVMRSSEGLRSIGRSLRFGVSRAVFPEDLKVSEKKIFDPQDKFLQLWNRLFLVSCILSVFVDPFFFYLPIVDQDVKCIGIDRKLAIAATTVRTIIDVFYLIRMAIQFRTAYIAPSSRVFGRGELVIDPAQIAKRYLRSHFIIDFLSVLPLPQIVIWRYLQRSKGSDVFATKQALLILVLFQYIPRLVRLLPLTSELKRTSGVFAETAWAGAAYYLLLYMLCSHVVGALWYLIGVERNDTCWQKACNRYKQQCNKNFLYCYSQNMQGYDRWKSIRDSVLDSNCTSDDNGPFDFGIFQQALQAGISSSDSFISKYCYCLWWGLQNLSTLGQGLETSTFPGEVIFSIALAIFGLILFALLIGNMQTYLQSLTIRLEEMRVKRRDSEQWMHHRLLPPELRERVRRYDQYKWLETRGVDEENLVSSLPKDLRRDIKRHLCLALVRRVPLFENMDERLLDAICERLKPSLYTEKTYILREGDPVDEMLFIIRGRLESETTDGGRSGFLNRSLLKEGDFCGDELLTWALDPRSGSNLPSSTRTVKAITEVEAFALEAEELKFVASQFRRLHSRQVQHTFRFYSQQWRTWAARFIQAAWRRYLKRKMMELRRKEEEEAEGASEALKNTGSGGSYSLGATLLASRFAANALRGVHRNRLSKAQDLVKLPKPPEPDFTADAD*

Click here to download the sequence:
Link to NCBI Protein BLAST