Transcript Information: S_Transcript_13345.p1


Annotated TAIR IDAT1G64140.1
Annotated Gene NameBEST Arabidopsis thaliana protein match is: loricrin-related (TAIR:AT5G64550.1); Has 3596 Blast hits to 2004 proteins in 150 species: Archae - 0; Bacteria - 54; Metazoa - 1597; Fungi - 38; Plants - 513; Viruses - 9; Other Eukaryotes - 1385 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:23804069-23806009 | Reverse length=646
E-Value2.1E-257
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 157.674175533955
Replicate 257.237179766353
Replicate 351.349846609911
Condition 2: 8 Hour
Replicate 126.443483993245
Replicate 224.896671557639
Replicate 324.66548080005
Condition 3: 24 Hour
Replicate 170.215696934053
Replicate 270.257815886677
Replicate 364.424307709068


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_13345.p1 GENE.S_Transcript_13345~~S_Transcript_13345.p1 ORF type:5prime_partial len:700 (+),score=140.25 S_Transcript_13345:1-2100(+)
GTAAAACCCCGGAAGTCAGTCAGACTGATATCTTCAGCTGAGAAACATATTGGACGTGAGCATCACATTTTTTGTTGGTCCATGGGCACTAGGGTTCCAGGTTTGGGCTTTCATTTTAACAATTCATCAAATGCATTCAAGGGTCTGGGAGAGTCGTTGCAAGTTCAGGGTTCTGGATCTGATTACTGTGCAGATACCATCCTACGGCTGCATCCCATTGGATCTTTTGTCCCTCACTTCCCTCTGTCAAGAGGAGTGAAGCATAAGTGGGGTTGGGGTGATGGAAACATGAGCCTGCATGTTGACTCTTCATTGTGTCTTGGACTGGGTCGTTTGTCTAGTTCATCAGACAGCAAAGGTAGCTCAGCAACTGGCTGTACTGCCATATCTTCAGCCAAAGAAACTGAGGCAGAATCCTCAATGGATCTTGATTTAGACTTTTCTCTCCACCTTGGTAGTGATAAGACACCTAGCCCAAAGAAACCTGCAGTTTCAAGTTTTAAGGGAGTAGATCCACAGCAGAAGCTTGATTTGGAGCTCAGCCTTTCTACTGGGCCTTCTGAATCAGACATCACCAGCATCCATGAAGGTTTATATGCCGTTCAAAATCTAGAGCCTCCCTTGGCTGTTGAGGTAACAAATTTTGTGGATAATGAATCAGCATCATCTCACTGGCAAACAGAAATTTGTTCATTTCCTGTGTTAGCAACTCCAGGAGCAGGAAGAAGTTTTCTTCCAAAGCAGATTCCTACGAAAGCTGATATTCCCTCTATCACTCCAGATATCTCGACAAGCATAGCAAGTGTTCCTAAAAGCTCAGTCACCTGTACTTCCGGAATTACTCAGCGGCCACAGCAGTCGCAACGTGGAAGCAGTTCAAAATTGTGTCAGTTTACTGGTTGTGGAAAGGGAGCACGAGGTGCTTCTGGCCTTTGCATTGCTCATGGTGGTGGGAGAAGGTGCCAAAGGCTGGGCTGCCACAAGGGTGCTGAAGGCAGAACTGCTTTCTGCAAGGCACATGGTGGTGGAAGACGATGTGAATTTCTTGGTTGCACAAAAAGCGCTGAAGGACGCACGGATTTCTGCATTGCCCATGGTGGTGGGCGCCGATGTGGTCAGGAAGGCTGCACTCGTGCTGCTCGAGGGAAATCTGGCTTGTGTATAAGGCATGGTGGTGGTAAGAGATGTCAAATGGAGAACTGCACTAGAAGTGCAGAAGGCTTGTCAGGACTGTGCATTTCCCATGGTGGAGGGCGTCGATGCCAATATCCAGCGTGCACAAAGGGAGCTCAAGGAGGCACAATGTTCTGCAAAGCACATGGTGGAGGAAAACGTTGCACTGTTGAAGGGTGTACCAAAGGTGCTGAGGGAAGCACACCCTTCTGCAAGGGCCATGGTGGAGGGAAAAGGTGTTCTTTCCAGGGATGCCCAAAGAGTGTTCATGGTGGGACTTCCTTCTGTGTAGCGCATGGAGGTGGCAAGAGGTGTGCTGTGAAAGGATGCACAAAAAGTGCTAGAGGAAGGACGGATTTTTGTGTCCGTCATGGTGGGGGCAAAAGATGTAGATTCGAGGGTTGTACCAAAAGTGCACAAGGAAGCACCGATTTCTGCAAGGCGCATGGAGGAGGGAAGAGATGTGCCTGGGGACAACCCGGGTCACATTATGGCAACCAAGCTGATGGCCCTTGTAGCTCCTTTACTCGGGGAAAAACAGGGTTTTGTGCAATGCATGGAGCCCTGGTTCAAGACAAGCGTGTTCACGGGGGTGTCACTTTGGGGCCTTTGTTGCAGGATCCAAAAACCATTGGGAGAAACATGGATGTTGTTCCTGAAGGAATGAATGTTGATGCCATTAAAACGGGATGCTCTAGTGTTATTGTTACAGGTTGGACTGCACACGATATGCAACATGCTGAGCTCCAATGTTCACAGATATGGCCTCAATCACCTCCGTCTCCAGAAGGCAGAGTCCATGGTGGAAGTTTAATGGCATTGCTTTGTAGTGGTTCAGGCCTCAAAGCAATCGATGGCATCATTAGTCATGTCGGAAGCTCGTCCATGCCCGTGGAATATCCGGTATTGCAGCAAAACTGGTTATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_13345.p1 GENE.S_Transcript_13345~~S_Transcript_13345.p1 ORF type:5prime_partial len:700 (+),score=140.25 S_Transcript_13345:1-2100(+)
VKPRKSVRLISSAEKHIGREHHIFCWSMGTRVPGLGFHFNNSSNAFKGLGESLQVQGSGSDYCADTILRLHPIGSFVPHFPLSRGVKHKWGWGDGNMSLHVDSSLCLGLGRLSSSSDSKGSSATGCTAISSAKETEAESSMDLDLDFSLHLGSDKTPSPKKPAVSSFKGVDPQQKLDLELSLSTGPSESDITSIHEGLYAVQNLEPPLAVEVTNFVDNESASSHWQTEICSFPVLATPGAGRSFLPKQIPTKADIPSITPDISTSIASVPKSSVTCTSGITQRPQQSQRGSSSKLCQFTGCGKGARGASGLCIAHGGGRRCQRLGCHKGAEGRTAFCKAHGGGRRCEFLGCTKSAEGRTDFCIAHGGGRRCGQEGCTRAARGKSGLCIRHGGGKRCQMENCTRSAEGLSGLCISHGGGRRCQYPACTKGAQGGTMFCKAHGGGKRCTVEGCTKGAEGSTPFCKGHGGGKRCSFQGCPKSVHGGTSFCVAHGGGKRCAVKGCTKSARGRTDFCVRHGGGKRCRFEGCTKSAQGSTDFCKAHGGGKRCAWGQPGSHYGNQADGPCSSFTRGKTGFCAMHGALVQDKRVHGGVTLGPLLQDPKTIGRNMDVVPEGMNVDAIKTGCSSVIVTGWTAHDMQHAELQCSQIWPQSPPSPEGRVHGGSLMALLCSGSGLKAIDGIISHVGSSSMPVEYPVLQQNWL*

Click here to download the sequence:
Link to NCBI Protein BLAST