Transcript Information: S_Transcript_133503.p1


Annotated TAIR IDAT5G08320.1
Annotated Gene NameCONTAINS InterPro DOMAIN/s: E2F-associated phosphoprotein, C-terminal (InterPro:IPR019370); Has 149 Blast hits to 149 proteins in 78 species: Archae - 0; Bacteria - 0; Metazoa - 79; Fungi - 0; Plants - 35; Viruses - 0; Other Eukaryotes - 35 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:2677153-2678603 | Forward length=150
E-Value4.3E-36
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.68826727332363
Replicate 20.19019646170271
Replicate 30.15898910416897
Condition 2: 8 Hour
Replicate 10
Replicate 20.7714430565423
Replicate 30.73502922775798
Condition 3: 24 Hour
Replicate 10.18831796112581
Replicate 20.97688843001497
Replicate 30.43486283457097


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_133503.p1 GENE.S_Transcript_133503~~S_Transcript_133503.p1 ORF type:complete len:116 (+),score=10.45,Eapp_C|PF10238.5|3.1e-15 S_Transcript_133503:65-412(+)
ATGGGAGGGCCAAAAGTGAGCGAGAGTGTAGCATCGCCAACCAATTCCCAGCAAACAGTTTCTGATGATGATGAGATAGATTACTCCACGAAACCGGAGTTTTATGATTCGGACCTTGATGATAAGGATGAGTCATGGGTGGCAAGCAAGAGGAAAGGCCGGTACACTGATGCCGTGCTCAGCTGCCCTGCTTGTTTCACCACTCTTTGCCTCGAGTGTCAGAGGTATTCTTTTACTTCTTGTAACATGAATTTCGGTTTTTGGGCAGTTCAGTGCGAGGCGAATAGTGAATTATTAAGACCAATGACTCAAAGTATATGTTGGATTTTCGATATAGAACCATTCTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_133503.p1 GENE.S_Transcript_133503~~S_Transcript_133503.p1 ORF type:complete len:116 (+),score=10.45,Eapp_C|PF10238.5|3.1e-15 S_Transcript_133503:65-412(+)
MGGPKVSESVASPTNSQQTVSDDDEIDYSTKPEFYDSDLDDKDESWVASKRKGRYTDAVLSCPACFTTLCLECQRYSFTSCNMNFGFWAVQCEANSELLRPMTQSICWIFDIEPF*

Click here to download the sequence:
Link to NCBI Protein BLAST