Transcript Information: S_Transcript_133505.p1


Annotated TAIR IDAT5G08320.1
Annotated Gene NameCONTAINS InterPro DOMAIN/s: E2F-associated phosphoprotein, C-terminal (InterPro:IPR019370); Has 149 Blast hits to 149 proteins in 78 species: Archae - 0; Bacteria - 0; Metazoa - 79; Fungi - 0; Plants - 35; Viruses - 0; Other Eukaryotes - 35 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:2677153-2678603 | Forward length=150
E-Value7.2E-66
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.3432831276259
Replicate 21.1100774620133
Replicate 31.7398807626038
Condition 2: 8 Hour
Replicate 12.6824390336016
Replicate 22.2512552090291
Replicate 32.815300627073
Condition 3: 24 Hour
Replicate 11.6486704521203
Replicate 21.567936649936
Replicate 32.5380673615211


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_133505.p1 GENE.S_Transcript_133505~~S_Transcript_133505.p1 ORF type:complete len:159 (+),score=33.68,Eapp_C|PF10238.5|1.9e-42 S_Transcript_133505:65-541(+)
ATGGGAGGGCCAAAAGTGAGCGAGAGTGTAGCATCGCCAACCAATTCCCAGCAAACAGTTTCTGATGATGATGAGATAGATTACTCCACGAAACCGGAGTTTTATGATTCGGACCTTGATGATAAGGATGAGTCATGGGTGGCAAGCAAGAGGAAAGGCCGGTACACTGATGCCGTGCTCAGCTGCCCTGCTTGTTTCACCACTCTTTGCCTCGAGTGTCAGAGGCATGAGATATATTTGACGCAGTACAGGGCCATGTTTGTTGTTAATTGTGAAATCAAGCATAAAAAGGTTTTTCCACAACGAAGTCAGAAGCGAAAAAGGAACAGGAAGAGAGCAGCGGGGCAAGCTGAAGGAAGTTCACAGAGTGGTGAAGCAGTCAGGCAAGTCTGCTGCTCACTTTGTTCCTCAGAGGTTGGAGTTATTGACGAGGATGAAGTTTATCATTTTTATGATGTCCTTCCAAGTGAGTCCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_133505.p1 GENE.S_Transcript_133505~~S_Transcript_133505.p1 ORF type:complete len:159 (+),score=33.68,Eapp_C|PF10238.5|1.9e-42 S_Transcript_133505:65-541(+)
MGGPKVSESVASPTNSQQTVSDDDEIDYSTKPEFYDSDLDDKDESWVASKRKGRYTDAVLSCPACFTTLCLECQRHEIYLTQYRAMFVVNCEIKHKKVFPQRSQKRKRNRKRAAGQAEGSSQSGEAVRQVCCSLCSSEVGVIDEDEVYHFYDVLPSES*

Click here to download the sequence:
Link to NCBI Protein BLAST