Transcript Information: S_Transcript_13351.p1


Annotated TAIR IDAT4G17610.1
Annotated Gene NametRNA/rRNA methyltransferase (SpoU) family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:9805652-9814910 | Reverse length=1850
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.4562339266468
Replicate 23.6157323640949
Replicate 33.7296071115259
Condition 2: 8 Hour
Replicate 18.7042409457686
Replicate 27.7893325814261
Replicate 39.3330983947599
Condition 3: 24 Hour
Replicate 13.3233403455078
Replicate 22.9013042648756
Replicate 32.542481903546


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_13351.p1 GENE.S_Transcript_13351~~S_Transcript_13351.p1 ORF type:complete len:1617 (+),score=351.69,SpoU_methylase|PF00588.15|3.8e-25 S_Transcript_13351:345-5195(+)
ATGCTGCAACAGAGAACTGAGAAATGTTCCTCCTCAAGTGATATCTTTTGTGCAGACAAATTTTACCCGTATTTGGTCTGGGATCTATGTAATCTAACTATTGAAATGCTTTCACAAAATCTTGAACATAGATCCTCTGCTGCTCGGCTTCTCCTTCCATCTTTATTCAAAGCATTTGCTTCAGTGTGCTCTTTTACTGTTTGCATTCAAGGAGAATGGCACAACATCTCCAGACATCACTTCTTCATGAAACTGTGGAAGTGTTCCAAAATGCTGTTTGCTCTGGGGCCTGTAGAGAGGAGAGATGCATATGGTATACTCTCTCTGTATTTGTCCTATATTTCTTGCGATGATCGATTTGAGGTGGAAATAGGTGATAAATCTGAAGGTTTTGACATAAGAGCTGAAAGAGAGTTCTGGGATGAAATAAAAAGAGGCTTGGTTGATGAAGAAGGCATGGTGCGAAAGCAATCTTTACACATACTGAAGAAAATACTTCTCATTAATGAGGGAGGAACACTAAGCCAAAATGTTGAAGAGAAAAAGTCGCACCAAAAAGGTCCAGTTCCTAATGGTATGACAAAAAGGGACCTGTGGGCTGAAGAGGAAGCCAAGTCACTAGGTGTAGGAAAAATATCTTTGTCAACTAACAGGTATTTGAGTGAGGAGCAGAAGTGGCAGGCATTCGTTCTTCTGTATGAAATGCTGGAAGAGTATGGCACTCACTTGGTTGAAGCAGCATGGAATCATCAGATGCTAACCCTGCTTCACTCGTCTGTTCATCATGAGAATTTTGTGGATCCTGAAACATCCAGTGAGAAGACTGATGTGCTTAGTCGCAACTTTGAGTGGTTAGCAATTTTGTGGGAACGTGGGCTATTTCATGATAATCCTCAAGTTAGATGCCTGATAATGCAGTCATTTCTTGATGTTGAATGGAAGAATCAGGACAACTGCATAGAACTGTTTCCAGAGGATTTTATATTGGGTGCATTTATGCATGGATTGAATGACCCAGTTCACCACAAAGATTTTGGTCTGAAAGGGGTGTACTCTTCAAAAACAATTGAAGGTGCTTCTAACTTCTTGCAACAGTATTCTAGTTTCCTATCCGAAAGGGAACGGATTTTATTTTTGTGCAAGTTGGCATCTGTGGCAAGACAACGCTCTCTTGGTCGGGTTGGTTTGATGTGCCTTTCAGAATGCATATTGTCTGCTAGTAAATCTTCAGATCAAGTAAATCATGTAGGCATGTCTGAAGCTGTGGATTGCTTATCTGATTTGACTGGAGTGGAATGCCTTCAAACTCAACCTTGTGCTGATAAAGATGATTTGATTGATGGTCTAAGATTTCTTGTTGAAAATAGCAAACAACATTTTAATCCTAATTACCGTCTTAAAGTGTGCAAGAATGTTGTAGAAGCTATTGCTTCGGTGGTGTTTGCTCATGAGGTTTCTCTTGAGGCACTATTGCACTTCATAGCTGCCTTGCCACGTGAATTGACGGACATTGGTGGTTCTTTAAGGATCAAAGTACAGAAATGGCTTACTAGAGTTCTCAAACAAGGCTGTACTGCAAACAGCTCTAGATGTAAAACGGAGCTTCTATGGAGTCTTTGTGATGTCCCTAGAAGTTTTACCACTTGTCAAAATTTCTCCAACATTGGAGGGTATTATGATGATGAAGACTTGTTTGCATGGAGCTCCGAATCTGAAAGATGGGCAAGAGTTCTATTTCTTCTTGTGGAGGAGGAAAACCAGCTGGAACCTCTTTTTATGTTTATCAAGGAAAAGGGCGCTAGTATCTGCCACCAGACCAGCGTGGAAAAAGGTGTGCCAGTGAAGTTTCTCATGCTTATCTTGAGCCTGGTTCAAGAGCTTGAAATAATGCGGCAAAGAATCCAAAGTGGCATCAAAACAAACCTTACAATTGATCCCAAAGTGAAGCTGCATGATACAGTGCATGAAAGTCGTATTACTCTGGAAAAATTGGTTGATGTTTTCCTGGTCATATTGGACAACTTGGCCGCGTTTGCTGAGACATCTTGTTCTATATTCTGGTCTGATGTTGTAGTGGATACTAGGCTTCCTGGTTCTGTAACTGGAAAGTTAGGAGGCCCAAGTCAACGGCGGCTGTCTAATGCTATGACTGCTGCTGTCTTGCAAGCAATCATTTCAGTAAGATCTGTTGCATCTGTATCATCATGCTGCCATCTTCTAAGGAAAGATTGTAGTCTAAATCTTTCTTTCACTTTCTTGTGGAAGTTCTTCCACATGGTTGTTTCCTCAGCAATAGCCGATTCTGAGACCAATGCAGAAATACATTTGGCTGCATATGAAGCTCTGAGTTTTGTTCTTAAAGCATCTGTTCCTGTGATATCTCCTTCGGCTATGAACTTCATTCAAGAAATGCATTGGTCATCTGACCCAGTATCAAAACAGAAGTCTATCCTTGATCCCCTACTTCTGACATTTTTGAATCACATAAATGGTTTTCTTGCTGGGCGACAATTGGCACGAACGCGTAGTGCTATATTAATGAATTTTAAGTGGCTCTGCCTTGAAGCTGTATTGTCAATTCCATTCCATGCTTGTGAAAATGGAATCCAGCTTGGACACGACAATACTTTCTTCTCAGATGCTGCTGTGAGGTTTGTTTTTAGTGACCTTGTTGAGAGCCTTGAGAATGCTGGAGAAAGTTCTGTTTTGCCTATGCTGAGATCAGTCAGAATGGTTTTGGATCTGTTGACTTCGTGCAATGCATTTGTCTCTTCATGTCATGGGGTTGATGCCGAGATGATGTGGAAATTGGTTCGGTCATCATGGATATTGCATACTAGCTGTAATAAACGGAGGGTTGCACCTATTGCAGCATTTCTCTCTTCTGTTGTGCATTCATCTGTTTTTGGAGACGAGTGCATGCATGTGGCTGATGATGCTCCCGGCCCTCTGAAGTGGTTCTGTGAAAAGATTCTTGAAGAAGGCTTGAAAAGTCCTCGTACCATTCGCCTAGCGGCTCTGCACCTGACAGGATTATGGCTTTTGAATCCTACTATTATTAAGTATTATATGAAGGAGCTTAAGCTTTTGACTCTCTATGGTTCTGTTGCTTTTGATGAAGATTTTGAAGCTGAATTGACTGAGAATGATGATGCAAGAACTGAGGTGTCATTATTGGCAAAAGGTCCAGATTTTGAGCTGACTGAAGCATATATCAATACAGAGTTGTATGCACGAGTTTCTGTCGCTGTGCTGTTTTACAAGCTTGCAGATTTAGCTGATATGGTTGGATCGGGGAAAGAAAGTGATGATTCCCCAGTGGCTCTTGAATCAGGGAAGTTATTCTTGTTGGAGCTTCTTGATTCAGTGGTTAATGACAAGGATCTTGCTAAAGAGCTGTATAAGAAGTATAGTGCAGTTCATCGCAAGAAAGCCCGTGCCTGGCAAATGATATGTGTTCTATCAAGATTTGCTCGTCAAGATGTTATTCAGCAAGTGACACACTACCTGTCAGTATCCCTCTATAGGAACAACTTGCCTGCTGTTCGACAGTACTTGGAAACCTTTGCAATACATGTTTACCTTAAATTCCCATCCTTGGTAGGAAAGCATTTAGTTACAACTATGTGTGATTATGATATGAAGACTCAGGCGCTGTCCTCTTATGTATTTATAGCAGCTAATATCATACTCCATGCAAAAGCGGAAGATCAAGCTCGGCACTTAAATGAACTGCTGCCCCCTATAATTCCATTGCTGACTTCTCATCATCACACCTTACGTGGTTTTACTCAGTTGCTCGTATATCAAGTTTTCTGTAAAGTGCTGCCTGCATCGGATTCTAACTGTTCTGGACCCATCATTTTGGAGAAAAGGTGCTTCAGTAATTTGAAGTCATACTTGGCTCTGAATCCTGACTGTAGGAGATTGCGAGCATCGATGGAAGGCTATCTTGATGCTTTTAATCCGGATGAGTCTGTTACCCCTGCTGGTATCTTCTCAAACCGTATTGAGGATATGGAGTTCGAATGTGTTCCAGTGTCTCTCATGGAGCAAGTAACGAATTTTCTGAATGATGTCAGAGAAGAACTTAGATGTTCAATGGCTAAGGATGAAGTTACACTCAAGAATGACACTTTAAGAATATCAGAGGATCCAGACTGCAGGCCCCGCTCAGCAGATGCTGGCCAGGTGTTGCTTGGTTCTCAGCGTAGTAATATATCATTGGACTTCCAGAAGTTCACTTATTGTAAACATGAAGTACTGAACAATAGTTCAGGTCAACTGGAGTTCAAGCCGCTTTTTGAGATGGAAAAGGAAGACCAACTGCTTGAGCAAATGTTGCGGTTGAGAATCATGTATATGGAAAAGTTGAAGGCAAACCGACAGCAATTGATACTTGTTGCATCTCTAATTGATCGTATACCTAACCTTGCTGGGCTGGCAAGGACTTGTGAGGTTTTCAAAGCAAGTGGCTTGGCAATAGCAGATGCTAATGTGCTACAAGACAAACAGTTCCAGCTGATAAGTGTGACAGCTGAGAAGTGGATTCCTATCATAGAGGTGCCTGTGAATAGTGTCAAAAGATTTGTGGAGAGGAAGAAACGAGAGGGTTTCTCAATTTTGGGTTTGGAGCAAACTGCAAATAGCATAGCCCTGGACAAGTATACCTTCCCACAGAAAACGGTTCTTGTTCTTGGGCGTGAAAAAGAGGGTATACCTGCTGATATTATCCATGTTTTGGATGCTTGTATTGAGATCCCACAGTTGGGAGTAGTTAGGTCACTCAACGTTCACGTCAGTGGTGCTATTGCTACCTGGGAATATACAAGACAGCAGAGATTGATGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_13351.p1 GENE.S_Transcript_13351~~S_Transcript_13351.p1 ORF type:complete len:1617 (+),score=351.69,SpoU_methylase|PF00588.15|3.8e-25 S_Transcript_13351:345-5195(+)
MLQQRTEKCSSSSDIFCADKFYPYLVWDLCNLTIEMLSQNLEHRSSAARLLLPSLFKAFASVCSFTVCIQGEWHNISRHHFFMKLWKCSKMLFALGPVERRDAYGILSLYLSYISCDDRFEVEIGDKSEGFDIRAEREFWDEIKRGLVDEEGMVRKQSLHILKKILLINEGGTLSQNVEEKKSHQKGPVPNGMTKRDLWAEEEAKSLGVGKISLSTNRYLSEEQKWQAFVLLYEMLEEYGTHLVEAAWNHQMLTLLHSSVHHENFVDPETSSEKTDVLSRNFEWLAILWERGLFHDNPQVRCLIMQSFLDVEWKNQDNCIELFPEDFILGAFMHGLNDPVHHKDFGLKGVYSSKTIEGASNFLQQYSSFLSERERILFLCKLASVARQRSLGRVGLMCLSECILSASKSSDQVNHVGMSEAVDCLSDLTGVECLQTQPCADKDDLIDGLRFLVENSKQHFNPNYRLKVCKNVVEAIASVVFAHEVSLEALLHFIAALPRELTDIGGSLRIKVQKWLTRVLKQGCTANSSRCKTELLWSLCDVPRSFTTCQNFSNIGGYYDDEDLFAWSSESERWARVLFLLVEEENQLEPLFMFIKEKGASICHQTSVEKGVPVKFLMLILSLVQELEIMRQRIQSGIKTNLTIDPKVKLHDTVHESRITLEKLVDVFLVILDNLAAFAETSCSIFWSDVVVDTRLPGSVTGKLGGPSQRRLSNAMTAAVLQAIISVRSVASVSSCCHLLRKDCSLNLSFTFLWKFFHMVVSSAIADSETNAEIHLAAYEALSFVLKASVPVISPSAMNFIQEMHWSSDPVSKQKSILDPLLLTFLNHINGFLAGRQLARTRSAILMNFKWLCLEAVLSIPFHACENGIQLGHDNTFFSDAAVRFVFSDLVESLENAGESSVLPMLRSVRMVLDLLTSCNAFVSSCHGVDAEMMWKLVRSSWILHTSCNKRRVAPIAAFLSSVVHSSVFGDECMHVADDAPGPLKWFCEKILEEGLKSPRTIRLAALHLTGLWLLNPTIIKYYMKELKLLTLYGSVAFDEDFEAELTENDDARTEVSLLAKGPDFELTEAYINTELYARVSVAVLFYKLADLADMVGSGKESDDSPVALESGKLFLLELLDSVVNDKDLAKELYKKYSAVHRKKARAWQMICVLSRFARQDVIQQVTHYLSVSLYRNNLPAVRQYLETFAIHVYLKFPSLVGKHLVTTMCDYDMKTQALSSYVFIAANIILHAKAEDQARHLNELLPPIIPLLTSHHHTLRGFTQLLVYQVFCKVLPASDSNCSGPIILEKRCFSNLKSYLALNPDCRRLRASMEGYLDAFNPDESVTPAGIFSNRIEDMEFECVPVSLMEQVTNFLNDVREELRCSMAKDEVTLKNDTLRISEDPDCRPRSADAGQVLLGSQRSNISLDFQKFTYCKHEVLNNSSGQLEFKPLFEMEKEDQLLEQMLRLRIMYMEKLKANRQQLILVASLIDRIPNLAGLARTCEVFKASGLAIADANVLQDKQFQLISVTAEKWIPIIEVPVNSVKRFVERKKREGFSILGLEQTANSIALDKYTFPQKTVLVLGREKEGIPADIIHVLDACIEIPQLGVVRSLNVHVSGAIATWEYTRQQRLM*

Click here to download the sequence:
Link to NCBI Protein BLAST