Transcript Information: S_Transcript_133925.p1


Annotated TAIR IDAT1G80150.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:30148738-30149931 | Forward length=397
E-Value5.6E-168
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.4561304393791
Replicate 24.1560138468807
Replicate 34.9323596502653
Condition 2: 8 Hour
Replicate 14.5626416492471
Replicate 23.381791073447
Replicate 33.8170238734501
Condition 3: 24 Hour
Replicate 13.8609561518259
Replicate 23.2150988515283
Replicate 35.1617207154656


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_133925.p1 GENE.S_Transcript_133925~~S_Transcript_133925.p1 ORF type:complete len:430 (+),score=45.98,PPR_2|PF13041.2|0.029,PPR_2|PF13041.2|2.8e-10,PPR_2|PF13041.2|1.9e-09,PPR_2|PF13041.2|2.7e-09,PPR_2|PF13041.2|0.002,PPR_1|PF12854.3|69,PPR_1|PF12854.3|4e+03,PPR_1|PF12854.3|0.0043,PPR_1|PF12854.3|0.00071,PPR_1|PF12854.3|0.1,PPR_1|PF12854.3|0.15,PPR_1|PF12854.3|0.0093,PPR_1|PF12854.3|7.6e+02,PPR|PF01535.16|7.8e+03,PPR|PF01535.16|0.073,PPR|PF01535.16|1e+02,PPR|PF01535.16|0.0052,PPR|PF01535.16|8.7e-05,PPR|PF01535.16|3,PPR|PF01535.16|8.2,PPR|PF01535.16|14,PPR|PF01535.16|1.1e+02,PPR_3|PF13812.2|1.1e+04,PPR_3|PF13812.2|1.8e+02,PPR_3|PF13812.2|3.8e+03,PPR_3|PF13812.2|38,PPR_3|PF13812.2|3,PPR_3|PF13812.2|0.17,PPR_3|PF13812.2|45,PPR_3|PF13812.2|3.4e+02 S_Transcript_133925:331-1620(+)
ATGCTTCAAAATATCTCTCGATATCTTCGACCTGTTCGTCGCTTCTCTGTTGCTCTTCACTCCATTTCGCCTTCTTCTTCTATCCCTACTATTGATACTTCGTCTTCAAATAGTTGTACTGACAACAGAAATGATAGTAACAATAACAGGAATACGGGTTCTTCTTGTAGACGTAATTTGAAACCTAGGGTTAAGTTGGAAGAACCAGCTCTTATTAAGCTAAAGAAGGAAAGAGACCCTGACAGGTTGTTTAGATTATTCAAGGAGAATGCTCTTAACCGTCTCCTTATTGAGAATAAGTTTGTTTTTGAGGATACAATTGCCCGGTTGGCCGGTGCTAAGAGATTTGATTATATAGAGCACTTACTTGAGCATCAGAAATCGTTGCCTCAAGGGCGGAGGGAAGGATTCGTTGTTAGGATTATTATGTTGTACGGTAAAGCTGGTATGGTTGAGCAGGCTGTTAATACTTTCTATAATATGCATTTGTTTGGTTGTAAAAGGACTGTTAAATCATTCAATGCTGCTTTGAAGGTTTTGAGTCAAACTCGGGACTTAGAGTTTATATATTCGTTTTTTGACGAGGTGCCTTGCAAGTTTGGGATCACAGTGGATATGATCTCGGTCAATATTGTGATTAATGTGTTTTGCTGGATGGGGATACTTGATAAGGCTTATTTGGTGTTGGTACAGATGGAGAAGATGGGGGTAGACCCTGATGTTGTTAGTTATACAACGCTTATATCGGCGTTTTATAAATGTGGTTGGTGGCAGATTGGGAACGGGTTGTGGAATCGAATGGTTTATAAAGGATGTTATCCGAATGTCGCTACTTTCAATGCGAGGATTCAATTTTTGGTTAGTAGGGGTCGAGCGTGGGAAGCTAATGACCTGTTGCTCTTGATGGAAGATATAGGGATGCAACCAGATGAGGTTACTTATGTTTTGGTTATCAAAGGGTTTGGGCAGGCTGGGATTTTTGACATGACAAAAAGGGTATATTCTGCTTTACATGGACGAGGTTATAAAGCCAACCTTAGGATTTATCAAACTATGGTACATTATTTATGTGAGGCTGGAGATTTTGATTGTGCATATAACATGTGTAGGGACTGCATGAATAAAAATTGGATGCTTAATGTAGACACCATTTGTACATTGCTTAAAGGTTTGAAGAGCATTGGAAAGCTAGACAAGGCTAAGGTGATTTTAGGCTTGGCTGAAAAAATTCATCCCCCCTTTCCGGCAAGGGAGTTGGATAATTTTAGATCTATATTAGCACGACAGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_133925.p1 GENE.S_Transcript_133925~~S_Transcript_133925.p1 ORF type:complete len:430 (+),score=45.98,PPR_2|PF13041.2|0.029,PPR_2|PF13041.2|2.8e-10,PPR_2|PF13041.2|1.9e-09,PPR_2|PF13041.2|2.7e-09,PPR_2|PF13041.2|0.002,PPR_1|PF12854.3|69,PPR_1|PF12854.3|4e+03,PPR_1|PF12854.3|0.0043,PPR_1|PF12854.3|0.00071,PPR_1|PF12854.3|0.1,PPR_1|PF12854.3|0.15,PPR_1|PF12854.3|0.0093,PPR_1|PF12854.3|7.6e+02,PPR|PF01535.16|7.8e+03,PPR|PF01535.16|0.073,PPR|PF01535.16|1e+02,PPR|PF01535.16|0.0052,PPR|PF01535.16|8.7e-05,PPR|PF01535.16|3,PPR|PF01535.16|8.2,PPR|PF01535.16|14,PPR|PF01535.16|1.1e+02,PPR_3|PF13812.2|1.1e+04,PPR_3|PF13812.2|1.8e+02,PPR_3|PF13812.2|3.8e+03,PPR_3|PF13812.2|38,PPR_3|PF13812.2|3,PPR_3|PF13812.2|0.17,PPR_3|PF13812.2|45,PPR_3|PF13812.2|3.4e+02 S_Transcript_133925:331-1620(+)
MLQNISRYLRPVRRFSVALHSISPSSSIPTIDTSSSNSCTDNRNDSNNNRNTGSSCRRNLKPRVKLEEPALIKLKKERDPDRLFRLFKENALNRLLIENKFVFEDTIARLAGAKRFDYIEHLLEHQKSLPQGRREGFVVRIIMLYGKAGMVEQAVNTFYNMHLFGCKRTVKSFNAALKVLSQTRDLEFIYSFFDEVPCKFGITVDMISVNIVINVFCWMGILDKAYLVLVQMEKMGVDPDVVSYTTLISAFYKCGWWQIGNGLWNRMVYKGCYPNVATFNARIQFLVSRGRAWEANDLLLLMEDIGMQPDEVTYVLVIKGFGQAGIFDMTKRVYSALHGRGYKANLRIYQTMVHYLCEAGDFDCAYNMCRDCMNKNWMLNVDTICTLLKGLKSIGKLDKAKVILGLAEKIHPPFPARELDNFRSILARQ*

Click here to download the sequence:
Link to NCBI Protein BLAST