Transcript Information: S_Transcript_13407.p1


Annotated TAIR IDATMG00860.1
Annotated Gene NameDNA/RNA polymerases superfamily protein
Annotated Gene Symbol(s)ORF158
Annotation TypeHomolog
Chromosome PositionchrM:235916-236392 | Forward length=158
E-Value4E-05
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.7296270600691
Replicate 21.3977518234144
Replicate 31.9540637903979
Condition 2: 8 Hour
Replicate 13.5988779945353
Replicate 25.5837983770372
Replicate 34.4354658315117
Condition 3: 24 Hour
Replicate 12.4696291002474
Replicate 22.0175867214334
Replicate 32.8789772150023


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_13407.p1 GENE.S_Transcript_13407~~S_Transcript_13407.p1 ORF type:complete len:1831 (+),score=147.19,RVT_1|PF00078.23|6.3e-28,MP|PF01107.14|1.6e-17,MP|PF01107.14|1.3e+03,MP|PF01107.14|1.3e+03,RVP|PF00077.16|4.1e-06 S_Transcript_13407:662-6154(+)
ATGGCGAACTTAGTTCGAAACTGGATTTTAAATTCAGTTAAGAAAACAGATGTCATTAAGAGTCAAGAAGTTTGCATACCTTACAATCAAGATGTGTCTAGATGGACTATTCCACAAGTTAAAATAGAAAATATTTATGATACAGGATTTTTAGGATTTTCAAGAGCTCATTCAGTTAAAATCCATGAGGAAGTCATAACCTTAGATCAAGAGTGTCAGAGTGTTCCTTTATTAGATACAAGAGCTATAAATCATTATAAACAAAAGGGTTTTAGATTTTTTCATTTTGGTTTATCCCAGATTGCTATTAAACCACTTACTCGTGAAGGATTGAATGTTCCTATATTCCTTGCTTTACGAGACAAAAGATTAAGAAATTATAAAGATTCTTTAATAGCAGTTGTTCAAGATAATATTTGTCATGGACCTATATTTTTCAATGTTTCTCCAAATTTCACTGTTGATATTACTGATCCTTTTATTCTAGATTCTTTGGTATTAGACATAAATATTTCAGAGGAAGGAATTTCAAAGTTCAAACAAGGTATGAAGAATTTTGCTATTATTTTCAAATTATTTTATAGAGTAACTACTTCTAATTTGAATAGTTATTGTCAATTAACTCCTTTAAAGGATGAAACTATCTTTTTAAAAGTAGAAAATTCTCATGCAAGAACTTTTACTCCAAAACGATTAAAATGGGAAGAAGTTATTATTCCAGAAGAGTTTGAAACCCAGAATGAAGAACCATTCCAAACTATATCCCAAAAAGAAATAGAATCAATTGTAGAGGAACCAGATGGAAAGGTACTGGTTAGATTCAATTCTTCAAGAGAACGACCTAGAACTAGTACCAGTTCGATGCCGTCCACTAACTTTGAAACAGCTAGAAAATCATTCTCAAAGGCATCATCTTTTCCTTCAAGATCCCAATCATTTCATGATTATCACTTTAGGAATCCAATTCCAGAACCAGTTCATGAGTCAATCCCTTCATCCCCAACTTCATCTCAGATGGCTCCGCCATCTTTTTCATCAATAAATGTTATTTCAAAACCATTTACAATAGACTTCGACTATTTATCTAAAGATGTACATTCTCCAGAAAACAAAGAAAAAATGGAGTGGTTAAGATCTGTTTTCGACAGATCAGCCAGAGAGCTTTTAAATAAGAAATGGCTGGCCTATAATCGAAAAGTAGAAATTAATATTCCATTCTTTATTTGGTATTCCATAACTACTAAAGAAAATAATTTTCCAGAACTGTTTTCAAAAGAAGTTGATGTTTTAACTTCCAAAAATATAGAATGGACTTGTGTTAACGGAGAATTAGTTAAATCTAACTATCCTCCGCCCACAGAAGTCAAAATTATTTCTAAAGAAGGCATCTGTACTGCTGCCCCTTTTAAGGTGGGGAGAGAGCAGGGAGATACTAGTCAAACAAATTTAGAAGATATTAAAAAGGTTTATATGCAAAATAATTTTACAAATCAAATGCTTATTTCAATGGCAGGACAAGTTGAGTCATTAGTTAGACCAGAAGATAAAAGGTTAGAAGAAAAAATAAATAGTGTTACAAAAGAATTCTCAAAATTAACTTTACAAAACGATGGAAAAGAAGTCTCTACTTCTTCTTCATCCACTTCTTCTTTTTCTACTGTTACAAGACCAGTTTTTCAAGTTCAGTTACCACCCTTGTTAGCTAGAATAGATGAGAAACTAACAGAAATAGATAAAGAAAAGGGAAAGTCTTCTATTACATGTTTAGATAACAACTGTCAAACTGATTCGGAAGAAGAATCAGAAGATATACAGGAAATAAACAAAATCCAGAGAGGAAACCCTGGACCCTCGAGGTTTTCTTGGCAAAATGTTTCGACTAGGAACTATTATCCTAGACCTACACCTCCTAACATTCAGTATGAAGAAAGAAAAGAGTTTAGGTCAGAAGGATATGATGGATCCGCTATATATGAGTGGAACATAGATGGAAAGTCAGAATACGAGATACTCAATACCCTTCAAGAAATGAATATAGCAGTTCAAGCTTATTATACTAGGAATATCAAGGATGGAAAAGAAATAATGAATAGGTTAGTTAGAGGTTTCACCGGACAGCTTAGGTACTGGTGGGACAATTTCTTAACTAGTCAAGAGAAGAATGATTTAATAAACCATACTACTCAAGAGAATATAGAAATGATAACCTCAGAAGGACAGAGACAGGTTAAGACTGAAGTTAGATCAGATGCTCCAGAAGTCCTTATCCATGCAATTAGCTTAAACTTTGTAGGAAATCCAGACCAAATAATGGATTCTTCCCAGATTCTTCTAACAAAATTAAGTTGTCCAACGTTAAACGATTATCGTTGGTATAAAGATGTTTTTATAACAAATCTAATGAGAAGGCAAGATGCTAGGGCCACTTTTTGGAAAGAAAAATTTATCTCCGGATTACCAAACTTATTTTCAAAAAGACTTATTCAAAAACTCCAAGATAAGACAGGATCCACAGAAATCCCGTGGAATGAATTGTCTTGGGGAAATATATTTTTATTTGTTCAAAATGAAGGATTAAGTCTATGTACGGAATTACAAATTCAAAAGAAATATTTATCCGAAAAAGCTCAATATAGAAGAGAACTAGGATCTTTTTGTGAGGCTTTTGGTCTTAAAAAGATTCAAGCTCCTTCAACTGTCAGTAAAAAGCAATATTCAAAATTTTCCAGAAAAAATCAACGATTTTACAAAAAGAAAATGCCAAGTAATCCAGAAGCTTTGCCAAAGCATCGGACAAGGCCCTCTTTCAAGAAAAAGAGAAATGAATTTACAAAGAAAATAGTTTGCTTCAAGTGTAGGCAACCTGGACACAAAGCTAATGAATGTCCAGTTAAAAATAGGATTTCAGAAATTTGTGGAGACAATCCTGATATGCAAGAAAAGATTTTGCAACTTTTTAATGTCAAAGATTCTGAAGAATCTGATAATGATATGATATGCCAGATAAATTCTGACGAGGATTCATATCAAGGGGATACATCAGATTCAGAAGGAAATTTCTTTTTGAATACAATAACTAAAGAAAAGGACGAAAAGGAATTTCTATTCAAAGTTATTTCTCAAATTACAGATCCAGAATTACAAAAGGATTATTTAGAACAGCTAAAAGGTTTAATGATTAAGGAAGAAAATGTTTCATATCCAGAACCCAAAAGTATTTCTCAGATTTTCAAAAAATATCCTACTCCTGATCCTTTCAAACAAATTACTACGAAGGAACTTCAAACAGAAGTAAACCTTCTTAAGGTTCAAATCAAAGATTTATCAACTCAGGTTTTACAACTTCAAGAAAAGGATATTTTATTGGAGGCAAAACTATCTCTTTTAGAAGCAAAAGGAGATAAACCTTCTTCTTCTCAAGAGATTGTAACTAATGATAATCTTTTAATTAATGATTTAGATAAAAATATCTTAGATCAAGATAGTATTAATATTTTAGATAAGATTAATTTTCAAAAATGGTATATAAAGGTGACTATTTCAGTGAAAGATTTTGTAATCAATACGGTTGCATTATTAGATAGTGGAGCGGATCAGAATTGTATGAAGGAAGGATTAATCCCTAAGCAGTTCTGTGAACCCACTGGAGAAAAGATCTATGGTGCAAACGGTGCAAGATTACAAGTTAAGCAAAAGGTTTCAAAAGCTTTTGTCCATAATCAAAATTATCATTTCAAGACCCCGTTTCTGTTAATCAAGAACATTAATCAACAAGTTATTTTGGGAACCCCGTTTATAACTCAAATCTATCCCTTTCAAGTAGATAACATCGGAATTCATACTAATATTTTTGGAAAAAGATTGTCATTCGAGTTTCTTTCTCCAGTATGCCAGAAAGAAATAATGATTCTCCAAAATTACACTATATTCAAAAATTTGAATCTAATCTCTAATAAAAAGAGTCAATTGAATTTCTTAACCAAAGAGATTTCTTATTCAAAAATAGAAGATCAATTGGCAAGATCTTCGCTACAATTAAAAATCTTGGATTTACAAAAGTTATTCGAAAAAGAAGTATGCTCAGATCATCCCAACGCCTTCTGGGATAGAAAGAAATATATAGTTTATTTGCCCTATGAAAAAGATTTTCTAGAGAGTAATATTCCTACTAAGGCAAGACCTATTCAAATGAACCTAGAACTTTTAGAATTTTGCAAAAATGAAATCCAAAGCCTTTTGGATAAAAAATTAATTCGTCATTCAAAATCTCCATGGAGTTGTCCAGCTTTTTATGTCATGAACCAAGCCGAAAAGGAACGAGGCGTTCCAAGGCTTGTTATCAATTATAAACCATTAAACAAGGTTTTACAATGGATTAGGTATCCCATACCTAATAAAAAAGATTTATTATCAAGATTATATGATGCTAAAGTATTCTCAAAATTTGATATGAAAAGTGGTTATTGGCAAATCCAGATTGCGGAACAAGATAGGTATAAAACTGCATTCACAGTGCCATTTGGACACTATGAATGGAACGTTATGCCATTTGGATTAAAGAATGCCCCTTCAGAATTCCAGAATATTATGAATGATATTTTTAATCCTTATACTCAATTTTCTATAGTTTATATAGATGATGTTTTAATCTTCTCTCAAAATATCGAACAACATTTTAAATATTTAAATATCTTTTTACATATAATCAAGAAAAACGGTTTAGTGGTCTCAGCACCAAAGATGAAAATTTTTCAAACTAAAGTAAGATTTTTAGGACACAACATATATCAAGGAACTATCAAACCTATTGATAGAGCTATAGATTTTGCAAATAGATTCCCAGATGAAATTAAAGACCAAAATCAATTGCAAAGATTTTTAGGATGTTTAAATTATGTTTCTGATTTCTTTCCAGATTTAAGACGAATTTGTGCTCCTCTGTATCAAAGATTAAGGAAAACTCCAAAACCATGGTCAGAATTGCATACGCAACTAGTAAGAAAACTTAAAGAAAAGGTCAAGAGTCTTCCATGTCTAGGTATTCCACATCCATATGCATTCATGATAGTGGAAACTGATGCTTCCAATATAGGATATGGAGGTATTCTGAAACAAAAAATAGAAGAGTCTAGTTCAGAACAATTAGTCAGATTTCATTCAGGTTTATGGCTCGGACCTCAAATGAATTACTCAACTATCAAAAAGGAAATTTTATCAATTGTTTTATGTATTTCAAAATTTCAAGATGATCTCTTTAATAAAAAATTTTTGTTAAGGATAGATTGTAAATCTGCAAAAGAAGTTTTACAAAAAGATGTTCAAAATCTTGTTTCAAAACAAATATTTGCAAGATGGCAAGCTATATTGTCTGTTTTTGATTTCGATATAGAATTTATCAAGGGAGAAAAGAATTCTTTACCAGATTTTCTTACAAGAGAGTTCCTTCAAGGAAGAGAGAGTGATTCAAAACACATTGCAGGTACTCATGGATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_13407.p1 GENE.S_Transcript_13407~~S_Transcript_13407.p1 ORF type:complete len:1831 (+),score=147.19,RVT_1|PF00078.23|6.3e-28,MP|PF01107.14|1.6e-17,MP|PF01107.14|1.3e+03,MP|PF01107.14|1.3e+03,RVP|PF00077.16|4.1e-06 S_Transcript_13407:662-6154(+)
MANLVRNWILNSVKKTDVIKSQEVCIPYNQDVSRWTIPQVKIENIYDTGFLGFSRAHSVKIHEEVITLDQECQSVPLLDTRAINHYKQKGFRFFHFGLSQIAIKPLTREGLNVPIFLALRDKRLRNYKDSLIAVVQDNICHGPIFFNVSPNFTVDITDPFILDSLVLDINISEEGISKFKQGMKNFAIIFKLFYRVTTSNLNSYCQLTPLKDETIFLKVENSHARTFTPKRLKWEEVIIPEEFETQNEEPFQTISQKEIESIVEEPDGKVLVRFNSSRERPRTSTSSMPSTNFETARKSFSKASSFPSRSQSFHDYHFRNPIPEPVHESIPSSPTSSQMAPPSFSSINVISKPFTIDFDYLSKDVHSPENKEKMEWLRSVFDRSARELLNKKWLAYNRKVEINIPFFIWYSITTKENNFPELFSKEVDVLTSKNIEWTCVNGELVKSNYPPPTEVKIISKEGICTAAPFKVGREQGDTSQTNLEDIKKVYMQNNFTNQMLISMAGQVESLVRPEDKRLEEKINSVTKEFSKLTLQNDGKEVSTSSSSTSSFSTVTRPVFQVQLPPLLARIDEKLTEIDKEKGKSSITCLDNNCQTDSEEESEDIQEINKIQRGNPGPSRFSWQNVSTRNYYPRPTPPNIQYEERKEFRSEGYDGSAIYEWNIDGKSEYEILNTLQEMNIAVQAYYTRNIKDGKEIMNRLVRGFTGQLRYWWDNFLTSQEKNDLINHTTQENIEMITSEGQRQVKTEVRSDAPEVLIHAISLNFVGNPDQIMDSSQILLTKLSCPTLNDYRWYKDVFITNLMRRQDARATFWKEKFISGLPNLFSKRLIQKLQDKTGSTEIPWNELSWGNIFLFVQNEGLSLCTELQIQKKYLSEKAQYRRELGSFCEAFGLKKIQAPSTVSKKQYSKFSRKNQRFYKKKMPSNPEALPKHRTRPSFKKKRNEFTKKIVCFKCRQPGHKANECPVKNRISEICGDNPDMQEKILQLFNVKDSEESDNDMICQINSDEDSYQGDTSDSEGNFFLNTITKEKDEKEFLFKVISQITDPELQKDYLEQLKGLMIKEENVSYPEPKSISQIFKKYPTPDPFKQITTKELQTEVNLLKVQIKDLSTQVLQLQEKDILLEAKLSLLEAKGDKPSSSQEIVTNDNLLINDLDKNILDQDSINILDKINFQKWYIKVTISVKDFVINTVALLDSGADQNCMKEGLIPKQFCEPTGEKIYGANGARLQVKQKVSKAFVHNQNYHFKTPFLLIKNINQQVILGTPFITQIYPFQVDNIGIHTNIFGKRLSFEFLSPVCQKEIMILQNYTIFKNLNLISNKKSQLNFLTKEISYSKIEDQLARSSLQLKILDLQKLFEKEVCSDHPNAFWDRKKYIVYLPYEKDFLESNIPTKARPIQMNLELLEFCKNEIQSLLDKKLIRHSKSPWSCPAFYVMNQAEKERGVPRLVINYKPLNKVLQWIRYPIPNKKDLLSRLYDAKVFSKFDMKSGYWQIQIAEQDRYKTAFTVPFGHYEWNVMPFGLKNAPSEFQNIMNDIFNPYTQFSIVYIDDVLIFSQNIEQHFKYLNIFLHIIKKNGLVVSAPKMKIFQTKVRFLGHNIYQGTIKPIDRAIDFANRFPDEIKDQNQLQRFLGCLNYVSDFFPDLRRICAPLYQRLRKTPKPWSELHTQLVRKLKEKVKSLPCLGIPHPYAFMIVETDASNIGYGGILKQKIEESSSEQLVRFHSGLWLGPQMNYSTIKKEILSIVLCISKFQDDLFNKKFLLRIDCKSAKEVLQKDVQNLVSKQIFARWQAILSVFDFDIEFIKGEKNSLPDFLTREFLQGRESDSKHIAGTHG*

Click here to download the sequence:
Link to NCBI Protein BLAST