Transcript Information: S_Transcript_13431.p1


Annotated TAIR IDAT5G38470.1
Annotated Gene NameRad23 UV excision repair protein family
Annotated Gene Symbol(s)RAD23D
Annotation TypeOrtholog
Chromosome Positionchr5:15404720-15407500 | Forward length=378
E-Value6E-183
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 136.247581429183
Replicate 234.965332311403
Replicate 331.796210817549
Condition 2: 8 Hour
Replicate 131.421208011573
Replicate 230.754212180687
Replicate 330.5976850431
Condition 3: 24 Hour
Replicate 131.91012094702
Replicate 232.991624446582
Replicate 327.45690909924


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_13431.p1 GENE.S_Transcript_13431~~S_Transcript_13431.p1 ORF type:complete len:395 (+),score=107.05,UBA|PF00627.27|6.6e-15,UBA|PF00627.27|5.1e+03,UBA|PF00627.27|1.7e-12,XPC-binding|PF09280.7|6.2e-23,ubiquitin|PF00240.19|1.4e-17 S_Transcript_13431:203-1387(+)
ATGAAAATCTTCGTCAAGACTCTCAAGGGCACCAACTTCGAGATCGAAGCCAATCCCGATGACACTGTTGCAGATGTGAAGAAAAATATTGAAAGTGTGCAAGGTGCAGATGTCTACCCTGCTAACCAACAGATGCTCATCCACCAGGGAAAGGTTCTTAAAGATACAACAACATTAGGAGAAAATAATGTTGCTGAGAATAGTTTTATAGTAATCATGTTATCTAAGAGCAAGCCTGCAGCAGCTGGAGCTTCATCTGCATCTCCTGCACCTGCTAGTCAGGCCCACCCTCGGAGCGCTACACCCCCTGTTGCCGCGCCAACATCAACTCCTCCCCAAACTCAGCCACAGGCTGCTACAGAACCCAGCCCTGCAGCGCCGACTCCGGCGTCTGTCCAAACCAGTGGTGAAGGAGTTAGGTATGGCCAAGCCGCATCAAATTTAGTTGCAGGAAGCATCTTGGAGGCTACCATTCAGGAGATGCTTGATATGGGTGGAGGCAGCTGGGACAGGGATACAGTTGTTCGTGCTCTACGTGCTGCATATAACAACCCTGAAAGGGCTGTTGAATATTTATACTCTGGAATTCCTGAGGAAACTGAAGCTCCTCCAGTTTCTCGAACGCCTGCTGCTGCTCCTACGGCTACGGGTGGGCAGACCGCTAACCCTCAGGCTCAAGCTCCTCCAGCAGCTGGATCTGTTCCATCAACAGGTCCTAATGCAAGCCCTTTAGATCTCTTTCCTCAGGGGCTTCCTAGTGTGGGTTCAAATGCTGGTGCTGGCTCTTTGGATTTCCTTCGCAATAGTCAGCAGTTTCAAGCATTGCGAGCTATGGTGCAAGCCAACCCCCAGATTTTGCAGCCTATGCTTCAAGAACTGGGGAAGCAGAATCCACAGCTGATGCGGCTCATTCAAGATCATCAAGCTGATTTTCTTCGCCTGATTAACGAACCTGTTGAAGGAGAAGGGAACCTCCTCTCGCAGTTGGCCTCTGCAATGCCACCAACTGTATCCGTCACACCTGAGGAGCGTGAAGCCATTGAACGCCTCGAAGCCATGGGGTTCAGACGGGCCACGGTTTTGCAAGTTTACTTTGCATGCAATAAGAATGAGGAGTTGGCAGCAAATTATCTCTTAGATCATATGGACGAGTTTGAGAATGAAGACGATGAGGGGCTTTCCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_13431.p1 GENE.S_Transcript_13431~~S_Transcript_13431.p1 ORF type:complete len:395 (+),score=107.05,UBA|PF00627.27|6.6e-15,UBA|PF00627.27|5.1e+03,UBA|PF00627.27|1.7e-12,XPC-binding|PF09280.7|6.2e-23,ubiquitin|PF00240.19|1.4e-17 S_Transcript_13431:203-1387(+)
MKIFVKTLKGTNFEIEANPDDTVADVKKNIESVQGADVYPANQQMLIHQGKVLKDTTTLGENNVAENSFIVIMLSKSKPAAAGASSASPAPASQAHPRSATPPVAAPTSTPPQTQPQAATEPSPAAPTPASVQTSGEGVRYGQAASNLVAGSILEATIQEMLDMGGGSWDRDTVVRALRAAYNNPERAVEYLYSGIPEETEAPPVSRTPAAAPTATGGQTANPQAQAPPAAGSVPSTGPNASPLDLFPQGLPSVGSNAGAGSLDFLRNSQQFQALRAMVQANPQILQPMLQELGKQNPQLMRLIQDHQADFLRLINEPVEGEGNLLSQLASAMPPTVSVTPEEREAIERLEAMGFRRATVLQVYFACNKNEELAANYLLDHMDEFENEDDEGLS*

Click here to download the sequence:
Link to NCBI Protein BLAST