Transcript Information: S_Transcript_134436.p1


Annotated TAIR IDAT4G20380.8
Annotated Gene NameLSD1 zinc finger family protein
Annotated Gene Symbol(s)LSD1
Annotation TypeHomolog
Chromosome Positionchr4:11005027-11006438 | Forward length=210
E-Value7E-34
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.7719214349075
Replicate 22.4321185338993
Replicate 32.468712704104
Condition 2: 8 Hour
Replicate 16.884574826791
Replicate 24.051594635541
Replicate 33.188985074761
Condition 3: 24 Hour
Replicate 12.9241182625205
Replicate 22.4983729296761
Replicate 34.7663705962424


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_134436.p1 GENE.S_Transcript_134436~~S_Transcript_134436.p1 ORF type:complete len:127 (+),score=7.68,zf-LSD1|PF06943.8|1.4e-11,zf-LSD1|PF06943.8|9.7e-12,zf-LSD1|PF06943.8|2.8e+03 S_Transcript_134436:218-598(+)
ATGGATCAGATCATATGCGGGGGTTGTCGAACTTTACTAATGTACACTCGTGGGGCGAGGAGTGTGAGGTGTCTATGTTGTCAAATGGTGAACTTGGCAATAAATCAGGTTGCCACAATCCATTGTGGATGCTGCCGCATGGCACTTATGTATCCAGCTGGAGCTCCATCGGTCAAATGTGCCATCTGTCACTTCATTACAAATGTTGGAACTGCCAATCATATGCCATATGGTGCTGGTAACTTTTCCGCGGATCCAACTTCATCATCAACGCCTCGTTGTGAAACTGAAACGGTGGTCATAGAAAACCCTACATCGTTCGATCAAAGTGGGAAACTGATTAATAGTATTGTTGTTGGGGTAACACCAAAACAGAAATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_134436.p1 GENE.S_Transcript_134436~~S_Transcript_134436.p1 ORF type:complete len:127 (+),score=7.68,zf-LSD1|PF06943.8|1.4e-11,zf-LSD1|PF06943.8|9.7e-12,zf-LSD1|PF06943.8|2.8e+03 S_Transcript_134436:218-598(+)
MDQIICGGCRTLLMYTRGARSVRCLCCQMVNLAINQVATIHCGCCRMALMYPAGAPSVKCAICHFITNVGTANHMPYGAGNFSADPTSSSTPRCETETVVIENPTSFDQSGKLINSIVVGVTPKQK*

Click here to download the sequence:
Link to NCBI Protein BLAST