Transcript Information: S_Transcript_134440.p1


Annotated TAIR IDAT4G20380.8
Annotated Gene NameLSD1 zinc finger family protein
Annotated Gene Symbol(s)LSD1
Annotation TypeHomolog
Chromosome Positionchr4:11005027-11006438 | Forward length=210
E-Value1E-29
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.7169678216246
Replicate 20.88962861119011
Replicate 30.59492697043873
Condition 2: 8 Hour
Replicate 11.7197895417043
Replicate 21.2629269393394
Replicate 31.0314119808862
Condition 3: 24 Hour
Replicate 11.0570104914804
Replicate 20.5483180220084
Replicate 31.4238250873856


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_134440.p1 GENE.S_Transcript_134440~~S_Transcript_134440.p1 ORF type:5prime_partial len:124 (-),score=12.36,zf-LSD1|PF06943.8|1.4e-11,zf-LSD1|PF06943.8|1.8e-11 S_Transcript_134440:74-445(-)
TGCGGGGGTTGTCGAACTTTACTAATGTACACTCGTGGGGCGAGGAGTGTGAGGTGTCTATGTTGTCAAATGGTGAACTTGACAATAAATCAGGTTGCCACGATCCATTGTGGATGCTGCCACATGGCACTTATGTATCCTGCTGGAGCTCCATCGGTCAAATGTGCCATCTGTCACTTCATTACAAATGTTGGAACTGCCAGTCATATGCCATATGGTGATGGTGCTGGTAACTTTTCCACGGATCCAACTTCATCATCAATGCCTCGTTGTGAAACTGAAACAGTGGTCATAGAAAACCCTACATCATTCGATCAAAGTGGGAAACCAATTAATAGTATTGTTGTTGGGGTAACACCAAAACAGAAATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_134440.p1 GENE.S_Transcript_134440~~S_Transcript_134440.p1 ORF type:5prime_partial len:124 (-),score=12.36,zf-LSD1|PF06943.8|1.4e-11,zf-LSD1|PF06943.8|1.8e-11 S_Transcript_134440:74-445(-)
CGGCRTLLMYTRGARSVRCLCCQMVNLTINQVATIHCGCCHMALMYPAGAPSVKCAICHFITNVGTASHMPYGDGAGNFSTDPTSSSMPRCETETVVIENPTSFDQSGKPINSIVVGVTPKQK*

Click here to download the sequence:
Link to NCBI Protein BLAST