Transcript Information: S_Transcript_134525.p1


Annotated TAIR IDAT5G50570.1
Annotated Gene NameSquamosa promoter-binding protein-like (SBP domain) transcription factor family protein
Annotated Gene Symbol(s)SPL13A, SPL13
Annotation TypeOrtholog
Chromosome Positionchr5:20582555-20583791 | Reverse length=359
E-Value1E-54
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 115.093940999058
Replicate 210.482569167874
Replicate 35.2759070885922
Condition 2: 8 Hour
Replicate 14.1377623003392
Replicate 22.0034491319158
Replicate 35.9917681078679
Condition 3: 24 Hour
Replicate 15.6514126443328
Replicate 27.8928697032056
Replicate 37.4662270751463


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_134525.p1 GENE.S_Transcript_134525~~S_Transcript_134525.p1 ORF type:5prime_partial len:402 (+),score=65.45,SBP|PF03110.10|1.8e-30 S_Transcript_134525:3-1208(+)
AATAAAATAAATAAAAAGTGGGAAGGCGGAGATTATATGGGCTATAATCTAAAGACAAATTACTGTAACTTTGCTGAATTGGAGAGGGGAGGAATAGCCACCATTTTTGGCTCAAATAGCCAGAGCACAGAAGGGGAAAGCATTGTGGATTTGAAACTTGGTAGTTTAGGTGACTTTGGGGAAGGCTTGACAAACCGTTTCAAGGATCGTGGAGGTTCTTTAATGGAGCCGTTCTCATCATCACCAGCTGGATCTTCAAAGAGGTCCCGCACACCTAGTAGCGGGGGGCAAGTCGTGTCATGTTTGGTTGACGGGTGCAAATCAGACCTTAGTAAATGCAGGGACTACCACCGACGCCACAAAGTTTGTGAGATGCATTCAAAGACCCCAAGAGTTACGATTGGAGGTCATGAACAACGCTTTTGTCAGCAATGCAGCAGGTTTCATGCATTGGGGGAGTTTGATGAGGGGAAAAGGAGCTGTAGGAAACGTCTTGAGGGGCATAATCGACGCAGAAGAAAGCCTCAGCCTGAACCCCTGCCTGTGAATCAGGGAAATTTCCTTTCTGCTAGCCAAGGAAGTAGATTTTTGCCATTTAGTAATCAGCCAATAATCCCAGCAAGTTCAGTAGTGAGTACTACTACTTGGTCTGGAGCTGTTAAGACTGAGAGCAACCCAGCCCTATACAGTAGCTCGGTATCAGGTCCTTACTCCCAACCCTACAGAGGTAGGCAGTTTCCCTTCCTACAACGACCTGATTCCCCTCTTACCGGAGGAGCTTCTTCAGCTAGTCAGATGCTTCATCATGACCCTAATTCCGTATCAGGAAATGTTGGCAGTAGCAGCAGCAATAATAGCAACAACAACGACAACCAGAAAATGTTCTGTAATGGTCTAAATCAAGTGATCAACCCTGATCGTGCTCTCTCTCTTCTGTCATCATCACCTGCAGAAATTCCCGAGATGGGACTGGGTCGTGTTATCCATTCCAGCCCCATCAACCCAGCCCGGCCCATCATAACTAGCATGCAGTACAATAACATTGGGCCATTTCATCCGGCTTCCCAAGCCCAAGCCCATGATAACTCTGCATTAGTCTCGAACATGAGGAACCATAACAGCATATGTCAGGATGTTTTCCAAGGTGGTTCTGATGGGTCATCTGGAAGTGGAGGTCATCAGACACTTTCCTTCTCTTGGGAATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_134525.p1 GENE.S_Transcript_134525~~S_Transcript_134525.p1 ORF type:5prime_partial len:402 (+),score=65.45,SBP|PF03110.10|1.8e-30 S_Transcript_134525:3-1208(+)
NKINKKWEGGDYMGYNLKTNYCNFAELERGGIATIFGSNSQSTEGESIVDLKLGSLGDFGEGLTNRFKDRGGSLMEPFSSSPAGSSKRSRTPSSGGQVVSCLVDGCKSDLSKCRDYHRRHKVCEMHSKTPRVTIGGHEQRFCQQCSRFHALGEFDEGKRSCRKRLEGHNRRRRKPQPEPLPVNQGNFLSASQGSRFLPFSNQPIIPASSVVSTTTWSGAVKTESNPALYSSSVSGPYSQPYRGRQFPFLQRPDSPLTGGASSASQMLHHDPNSVSGNVGSSSSNNSNNNDNQKMFCNGLNQVINPDRALSLLSSSPAEIPEMGLGRVIHSSPINPARPIITSMQYNNIGPFHPASQAQAHDNSALVSNMRNHNSICQDVFQGGSDGSSGSGGHQTLSFSWE*

Click here to download the sequence:
Link to NCBI Protein BLAST