Transcript Information: S_Transcript_134993.p1


Annotated TAIR IDAT5G41580.1
Annotated Gene NameRING/U-box superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:16626563-16630659 | Reverse length=760
E-Value1.4E-61
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30.40473128363889
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_134993.p1 GENE.S_Transcript_134993~~S_Transcript_134993.p1 ORF type:5prime_partial len:158 (-),score=18.16,zf-MIZ|PF02891.16|7.7e-22,zf-Nse|PF11789.4|1.1e-05 S_Transcript_134993:291-764(-)
AATCTCTTCATGGATCAAGGGCCTCAGCTTCCAACCATTGTCAATCAATTGCTTAAATACGGAACGAATCTGCTTCAAGCTGTCGGTCAATTTAATGGTCACTACATTATTCTCATTGCTTTCATGAGCATTGTACCGACTTCTGCCCTCCCAGCTCCGCGAGATTATGTGCAGCCTGAAACTGTTGCATCAAGTTCAGGGATAGATTCTGAGATTATTGAAGGACCATCACGTATTCGTCTCAATTGCCCTATAAGTTATCGACGCATTAGAATACCTGTGAAAGGACATTTGTGCAAGCATTATCAATGTTTCGACTTGAACAACTTTGTGGAGATCAATTCAAAACGACCATCCTGGCGGTGTCCTCATTGCAATCAATCTATCTGTTTCACTGATATACGTGTTGATCAAAATATGGTCAAGGCAAATTCTGAAGGAGGCAGGCGAAGATGTTTCAGAGGTGATGATTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_134993.p1 GENE.S_Transcript_134993~~S_Transcript_134993.p1 ORF type:5prime_partial len:158 (-),score=18.16,zf-MIZ|PF02891.16|7.7e-22,zf-Nse|PF11789.4|1.1e-05 S_Transcript_134993:291-764(-)
NLFMDQGPQLPTIVNQLLKYGTNLLQAVGQFNGHYIILIAFMSIVPTSALPAPRDYVQPETVASSSGIDSEIIEGPSRIRLNCPISYRRIRIPVKGHLCKHYQCFDLNNFVEINSKRPSWRCPHCNQSICFTDIRVDQNMVKANSEGGRRRCFRGDD*

Click here to download the sequence:
Link to NCBI Protein BLAST