Transcript Information: S_Transcript_13517.p3


Annotated TAIR IDAT1G77710.1
Annotated Gene NameCONTAINS InterPro DOMAIN/s: Ubiquitin-like, Ufm1 (InterPro:IPR005375); Has 244 Blast hits to 244 proteins in 106 species: Archae - 0; Bacteria - 0; Metazoa - 149; Fungi - 0; Plants - 47; Viruses - 0; Other Eukaryotes - 48 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:29206750-29207895 | Forward length=93
E-Value1.4E-55
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 1239.23979235376
Replicate 2199.02474746675
Replicate 3185.96425550964
Condition 2: 8 Hour
Replicate 1304.55323046656
Replicate 2288.03755123648
Replicate 3296.42350575677
Condition 3: 24 Hour
Replicate 1226.18556447553
Replicate 2219.31959327528
Replicate 3234.61755889342


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_13517.p3 GENE.S_Transcript_13517~~S_Transcript_13517.p3 ORF type:complete len:96 (+),score=18.90,Ufm1|PF03671.10|1.3e-43 S_Transcript_13517:2010-2297(+)
ATGGCGAGTGGAGAAGGAGGAGGAAAGGTATCCTTCAAGATCACCCTCACCTCCGATCCCAAGCTTCCTTTCAAAGTGTTCAGTGTGCCGGAAGCAGCGCCTTTCACCGCCGTTCTCAAATTCGCTGCCGAGGAATTCAAGGTCCCTCCTCAGACCAGTGCTATCATCACCAACGATGGTGTGGGAATCAATCCTCAGCAAAGTGCAGGCAATGTCTTCCTCAAACATGGGTCTGAATTGCGCTTGATTCCCCGTGACAGAGTTGGCACATCACCAGCATCCTATTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_13517.p3 GENE.S_Transcript_13517~~S_Transcript_13517.p3 ORF type:complete len:96 (+),score=18.90,Ufm1|PF03671.10|1.3e-43 S_Transcript_13517:2010-2297(+)
MASGEGGGKVSFKITLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAIITNDGVGINPQQSAGNVFLKHGSELRLIPRDRVGTSPASY*

Click here to download the sequence:
Link to NCBI Protein BLAST