Transcript Information: S_Transcript_135427.p1


Annotated TAIR IDAT1G55350.5
Annotated Gene Namecalpain-type cysteine protease family
Annotated Gene Symbol(s)DEK1
Annotation TypeOrtholog
Chromosome Positionchr1:20654463-20664501 | Reverse length=2179
E-Value3.4E-73
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.3482059913395
Replicate 20.64890557522102
Replicate 32.5765587175618
Condition 2: 8 Hour
Replicate 11.7248477462387
Replicate 21.6449888705681
Replicate 33.2914176448868
Condition 3: 24 Hour
Replicate 13.2124828662639
Replicate 23.1662677937544
Replicate 32.4109307151949


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_135427.p1 GENE.S_Transcript_135427~~S_Transcript_135427.p1 ORF type:5prime_partial len:136 (-),score=29.65,Peptidase_C2|PF00648.17|1.2e-26 S_Transcript_135427:32-439(-)
GGGAAACCAGCATTTGCTACCAGTCGCAAGGCAAATGAACTCTGGGTATCTGTGCTGGAGAAGGCGTATGCCAAGTTGCATGGTTCATATGAAGCATTGGAGGGAGGGCTTGTCCAAGACGCTCTAGTGGATCTTACTGGGGGAGCTGGTGAAGAAATTGATATGAGAAGTGCACAGGCTCAAATTGATCTTGCTAGTGGGAGGCTATGGTCCCAACTATTGCGCTTTAAACAGGAAGGCTTTCTATTAGGTGCTGGGAGTCCCTCTGGGTCGGATGTGCAGGTTTCTTCTAGTGGTATTGTGCAGGGGCATGCGTACTCAATATTGCAGGTTACTGAAATGCTGCTGTTAATCTGGGCATGTTATGGTGGTGTCTTTTCTCGTCTACATAGCTGTCCATACTGTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_135427.p1 GENE.S_Transcript_135427~~S_Transcript_135427.p1 ORF type:5prime_partial len:136 (-),score=29.65,Peptidase_C2|PF00648.17|1.2e-26 S_Transcript_135427:32-439(-)
GKPAFATSRKANELWVSVLEKAYAKLHGSYEALEGGLVQDALVDLTGGAGEEIDMRSAQAQIDLASGRLWSQLLRFKQEGFLLGAGSPSGSDVQVSSSGIVQGHAYSILQVTEMLLLIWACYGGVFSRLHSCPYC*

Click here to download the sequence:
Link to NCBI Protein BLAST