Transcript Information: S_Transcript_13562.p5


Annotated TAIR IDAT1G21580.1
Annotated Gene NameZinc finger C-x8-C-x5-C-x3-H type family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:7557822-7565655 | Reverse length=2166
E-Value1.1E-75
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.1088750514659
Replicate 22.2982072455745
Replicate 31.152671005225
Condition 2: 8 Hour
Replicate 13.4061387312087
Replicate 22.1750408399734
Replicate 32.8125076701017
Condition 3: 24 Hour
Replicate 11.3653052181621
Replicate 22.5182012862608
Replicate 32.452143206053


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_13562.p5 GENE.S_Transcript_13562~~S_Transcript_13562.p5 ORF type:complete len:144 (+),score=3.31,zf-CCCH_3|PF15663.1|0.00031,zf-CCCH_3|PF15663.1|0.014,zf-CCCH|PF00642.20|0.034,zf-CCCH|PF00642.20|96,zf-CCCH|PF00642.20|0.12,zf-CCCH|PF00642.20|1.5 S_Transcript_13562:7280-7711(+)
ATGTTGGCTAGTGAAAAAGTTCGATGGAGTTTACATACCGCTAGAATGCGACTAGCCAAAAAACGGAAGTTCTGCCAGTTTTTTACTAGATTTGGCGAATGTAAAAAGGGTGAAGGAAGATGTCCTTATATCCACGATCCATCCAAAATAGCTGTCTGCACAAAATTTCTGAATGGTTTCTGCGGTGACCCAAACTGCAAGTTGACTCATAAGGTTATTCCAGAAAGAATGCCTGATTGTTCGTTTTTTCTGCAAGGCTTATGCTCCAATGAGAATTGTCCATACAGACATGTGAATGTGAATCCAAAGGCTTCTATATGCGAAAGCTTCCTCAGGGGCTACTGTGCTGAAGGGAACGAGGTACTAATAGCATGCACTACCCAATACTATACGGTCTATACCCCAAATTTGAAATGCTGCCTCTGTTCTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_13562.p5 GENE.S_Transcript_13562~~S_Transcript_13562.p5 ORF type:complete len:144 (+),score=3.31,zf-CCCH_3|PF15663.1|0.00031,zf-CCCH_3|PF15663.1|0.014,zf-CCCH|PF00642.20|0.034,zf-CCCH|PF00642.20|96,zf-CCCH|PF00642.20|0.12,zf-CCCH|PF00642.20|1.5 S_Transcript_13562:7280-7711(+)
MLASEKVRWSLHTARMRLAKKRKFCQFFTRFGECKKGEGRCPYIHDPSKIAVCTKFLNGFCGDPNCKLTHKVIPERMPDCSFFLQGLCSNENCPYRHVNVNPKASICESFLRGYCAEGNEVLIACTTQYYTVYTPNLKCCLCS*

Click here to download the sequence:
Link to NCBI Protein BLAST