Transcript Information: S_Transcript_135647.p1


Annotated TAIR IDAT5G24280.1
Annotated Gene Namegamma-irradiation and mitomycin c induced 1
Annotated Gene Symbol(s)GMI1
Annotation TypeHomolog
Chromosome Positionchr5:8251378-8261401 | Reverse length=1598
E-Value4E-79
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.8936506244032
Replicate 23.706348302511
Replicate 33.140079923428
Condition 2: 8 Hour
Replicate 14.3812663421124
Replicate 24.8501964701337
Replicate 35.6132538528441
Condition 3: 24 Hour
Replicate 13.3721954083097
Replicate 22.5982349253247
Replicate 34.0366722600697


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_135647.p1 GENE.S_Transcript_135647~~S_Transcript_135647.p1 ORF type:5prime_partial len:881 (+),score=173.11 S_Transcript_135647:3-2645(+)
CAGGGTCTGTATATTTTTCCAGTTGGTTCTGTATCAACCTTGTTTCAAAAGGCTGGGGTTTATTCATTCTCATTCACTCTTAAGAACTCACCATGTGAGGTATGTGAAATAAGTGTACGGGTAAAGGCTTCGTCTAAGGTTAAACACTGGGAACTCATAAATGTCCAACATCTGGATTTCATTGCGAGGGCCGGTTCATGCTTCCCACCATTCTCAGTTGCTCGTTATGATATATATGGCAATCGGGTTCAATTTACATCAATTCCAGAGATAGAATTCAAGCTGGTTTCCGATGATCTTGTGCTTTGCCACATGAGGAAAGTGAAGCTGGAACTGTCTTCAGATAGTTTTCATTTGGTTGTTAGGAATGTTCGCATAACAACTGATAACTTAGACAAGATTCGTCCAAGCTATAAAGCTACTTTGTCTTTGTCTCAGCCAGATAAGCTACCCTTTCTTGGCATTCCTTGTCAAGTTATGCCTGGACCACTATTCAATGTTATTTTCCACTCATCAGAATCTACCAATGAGTTGGTTCCCAAGCAGGTGGTTCAGGATATAAAACTGGAGATCTTTGATAGACATGGGAACCATGTCAAAGAAGGCACCGAGATTGAGTTGGCACTTCATGGATTCTGCGTTTTGGATCAGATTGGTCTAAAGCACAAGGTAGATAGTCTTGGTTTTATTGATCTTAGTGGCCTTCTGAAAGTCACAGGACCTTATGGAGCACCAGTATTTTTTTCTGTCCTATCTGGTAAAGAAGTGATTTTTAAAAAAAAATTTCAAGTGGAGAAGCGGGAACTCAGAATAGCAACCAGGGTACCTGCAATTTGTCGTGCTGGATCCCAGCTAAAAGATGTTGCTTTTGAAGTTATTAATTCTGAAGGTGACATTGATCGGACTATCGATGATGATGGCAAGCATGGCCAGTCACATACTCTAACCATAAAGACAGACTTGCCAGACTTTGACAATTCTTTAAGATATGCTTTTCGCAATGGGCGTTGCATCATTTCTTCTATTGTTCTTCCTAATAAAGGGGGGAGCTTTTACATAGACGCCATTCACTCTCATCAAAAAGAGCTACATTTGAATTTAAAGATTAATGTCTCAGAAGAAACAACAGAAAGTTACATCCCTTCTGATCGCAAAGGTTCAGACAAGGAGCATCTCGATGCCATATCTCAATTTTCAGATGAGTTAAACTCGGACGAGGAGCACCTTGAAGCCACTACTCGATCTTCAGATGAGAAAATCATTTCTCCTACAATGTCTGCAAAGAATTTGGTTTCTGAACCTCAACCACAGAGGAAGGAGTCTCATGATAGATCCCCTGTGAAAGAAGTTTATGAACTCCATCAGGATTCATTTGACTCTAAGAATGGTGCTGTTTTGGGGGGATTGAAATTTCAGGATCAACAGGATATTCTTTCAAAAACTCCAATTAAGAAGTATGATCTACGTCATGATTTCGACAATGACATGTTTCAATCCCCACAATCCATTGACCCTGTGCGTGTTGTAAAATTAACGGAGCCCGAGTTTCAGGACATTCAGGATATTGAAAATGAAGTCTTGAACTATGGTGTGCATATTAAAAGCTTTGAAGAGGACTTGTATGATCTTGAGGCCCACAGGGTGGCAGCTGAGGCAGAGTTGTTGAAGTTGCAAGCATCAATGGAACTCCTGCCATTAGATCAGTCAGAATACATGTCTGAAAAAGAGCTAATATCACTCAAAATACAAAAGGAGGTTGGGTCAGCAGCTGCTGTTAGCGTAATTTCCAGGAATATGTTATCAAATGCGCAGCACGCCAACATTATGGAGACTATGGTTGACGTAGTAGCCCTTCTCGGAGCAGCTTCATCAGACACACTTAGCTGTTTGTTGGCTGAGTATGTGGGGAAAGATCAAATGTTAGCCATTGTATGTCGATCCAGTGTTCTTGTTACACATCCAGAAACTTACGAACGTGCACTAAGGTCTGTAGGTGCTGGATTAGGGAAGGATATCAAAGGCAGATACCTATTTATTTATCTCGAGGATATAAGGCCGTATACTGGAGATGTTGAAATGGATGATCCTCAGAGAAGATTGGCTTTACCAAAGCCCACCTTATCTGATGGAACAACTCCACAAGGTTTCTTGGGATATGCAGTTAACATGATTGACATAGATGTCAACCATCTAGAAACTAAGACAACTGCAGGCCATGGCTTACGTGAAACTCTATTCTATCGACTCTTTGGAGATGTCCAAGTCTATGACTCAAAAGAGCACATGAAACAGGCTTTTGGCTGTATTAAAGACGGTGCTGTATCTCTTGATGGAGGCATTGTTCAGGGGAACGGAATATTCTCACTGGGATGCAAGCAAGTGGATGTGCATTTTCCTGTTGTCCCACTGGATCATCGATTGGTAGTCACTCCAACAGAGATCGCGATACAAATTGAAAAGAAGAAAGTAGTTGAGGAAGCAATTGCTTACACAAGCAACAGGAGAAGTACACACTTGAAGCTCTTCCAAGAAAGGCATGCCAAGTATTTGACGTTATTGGAAGACAAAGAAGCAAGACAAAAACAACTCTTTTCACAGGAATCTGTGAAAATTTCACCTGTGCCTTCTCAAAGTCCTATTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_135647.p1 GENE.S_Transcript_135647~~S_Transcript_135647.p1 ORF type:5prime_partial len:881 (+),score=173.11 S_Transcript_135647:3-2645(+)
QGLYIFPVGSVSTLFQKAGVYSFSFTLKNSPCEVCEISVRVKASSKVKHWELINVQHLDFIARAGSCFPPFSVARYDIYGNRVQFTSIPEIEFKLVSDDLVLCHMRKVKLELSSDSFHLVVRNVRITTDNLDKIRPSYKATLSLSQPDKLPFLGIPCQVMPGPLFNVIFHSSESTNELVPKQVVQDIKLEIFDRHGNHVKEGTEIELALHGFCVLDQIGLKHKVDSLGFIDLSGLLKVTGPYGAPVFFSVLSGKEVIFKKKFQVEKRELRIATRVPAICRAGSQLKDVAFEVINSEGDIDRTIDDDGKHGQSHTLTIKTDLPDFDNSLRYAFRNGRCIISSIVLPNKGGSFYIDAIHSHQKELHLNLKINVSEETTESYIPSDRKGSDKEHLDAISQFSDELNSDEEHLEATTRSSDEKIISPTMSAKNLVSEPQPQRKESHDRSPVKEVYELHQDSFDSKNGAVLGGLKFQDQQDILSKTPIKKYDLRHDFDNDMFQSPQSIDPVRVVKLTEPEFQDIQDIENEVLNYGVHIKSFEEDLYDLEAHRVAAEAELLKLQASMELLPLDQSEYMSEKELISLKIQKEVGSAAAVSVISRNMLSNAQHANIMETMVDVVALLGAASSDTLSCLLAEYVGKDQMLAIVCRSSVLVTHPETYERALRSVGAGLGKDIKGRYLFIYLEDIRPYTGDVEMDDPQRRLALPKPTLSDGTTPQGFLGYAVNMIDIDVNHLETKTTAGHGLRETLFYRLFGDVQVYDSKEHMKQAFGCIKDGAVSLDGGIVQGNGIFSLGCKQVDVHFPVVPLDHRLVVTPTEIAIQIEKKKVVEEAIAYTSNRRSTHLKLFQERHAKYLTLLEDKEARQKQLFSQESVKISPVPSQSPI*

Click here to download the sequence:
Link to NCBI Protein BLAST