Transcript Information: S_Transcript_135705.p1


Annotated TAIR IDAT3G15720.1
Annotated Gene NamePectin lyase-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:5325329-5327457 | Reverse length=456
E-Value4.2E-121
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 110.543575668353
Replicate 218.903440217537
Replicate 310.827954836672
Condition 2: 8 Hour
Replicate 16.0057185141329
Replicate 28.2225887601859
Replicate 310.327248362318
Condition 3: 24 Hour
Replicate 113.92024795224
Replicate 218.823404364126
Replicate 39.3303505555919


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_135705.p1 GENE.S_Transcript_135705~~S_Transcript_135705.p1 ORF type:complete len:419 (+),score=35.22,Glyco_hydro_28|PF00295.13|2.1e-89,Pectate_lyase_3|PF12708.3|7.3e-11,Pectate_lyase_3|PF12708.3|5.8 S_Transcript_135705:344-1600(+)
ATGCACATTCAACATACCAAAGTGGTTAAAAAGGAGGCTGTGGTGAACAATATGATCTGTAGGAATACTTTGTTATCTTTCTTTTTATTCAGCAACATTATAGTAGCTTCAAGTCGTCATTGTCCTAGTTCAAGTACCGACTCTTGTGTGGCTAATGTGATGGATTATGGGGCAGTTGGAGATGGTAAAACCGATGACTCTAAGGCTTTCCTCAAGGCTTGGGGTGATGTATGCAATAGTAAAAAAGGAGCTTTGGTTTATTTAGTACCAAAAGGCAAGAAATTCTTGTTAAAACCAATATTGTTCCAAGGTCCATGCAAGTCTTCATCAATCCAAGTTGAGATACTTGGAAAACTTGTAGCACCAAAGCATAACGAGTGGACCAATTGCCAAAGTACTTGGCTTTATTTTACAAATATACAAGGTCTCAATATTAATGGATCGGGCCATATTGACGGTCAAGGTTCAACTTGGTGGGGAAATGCTCAGACGAATTGTAACCACCCTACGGCTCTGGGTTTTCGTAACTGTGACAACCTTCGCATTCATGGCCTGAAACATTTGAATAGCGCCAGAAATCACATTTCAATATTTGCGAGTAAGAATGTAGATATCTCAAATGTTCATATCAATGCTCCAGAAAACAGCCCCAACACTGATGGAATTGACATTTGTGCCTCCAAAAATGTTCACATTCATGACTCTTTTATTGGAACAGGAGATGATTGTATTGCAATTAATGCTGGATCATCATATATCAATATCACCAACGTACAATGTGGACCAGGTCATGGTATAAGTGTCGGTAGCTTAGGTGCAAATGGAGCAGATGAGTCAGTAAAAGAGGTACTTGTAAAAAATTGTACATTGATTGGGACAACAAATGGTGCACGAATCAAGACATGGGAGGGTGGATCAGGATTTGCAAGTAATATTACATTCGAAGATATAATAATTCAAGACTCTAGAAATCCTATAATCATCGACCAACATTATGGTGGCAATCTAAAAAGGCCCTCAGTAAATGCCGATTCTGATGTGAAAGTGAGCAATGTGACATATCGTAATGTGCATGGAACTTCAGCAAGTGACATCGGAATTAACTTGTTGTGTAGCCATCATATGCCATGTACAAACATAATGTTTGAGAAAATCAATTTAGTTATGTCCGTATCAGGAAAAAAGATAAAGCAATTGTGTGAGAATGTTGAATTTGGTGATGGTTCTAATATTCGCTTCCCATGTAAAAAAAGATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_135705.p1 GENE.S_Transcript_135705~~S_Transcript_135705.p1 ORF type:complete len:419 (+),score=35.22,Glyco_hydro_28|PF00295.13|2.1e-89,Pectate_lyase_3|PF12708.3|7.3e-11,Pectate_lyase_3|PF12708.3|5.8 S_Transcript_135705:344-1600(+)
MHIQHTKVVKKEAVVNNMICRNTLLSFFLFSNIIVASSRHCPSSSTDSCVANVMDYGAVGDGKTDDSKAFLKAWGDVCNSKKGALVYLVPKGKKFLLKPILFQGPCKSSSIQVEILGKLVAPKHNEWTNCQSTWLYFTNIQGLNINGSGHIDGQGSTWWGNAQTNCNHPTALGFRNCDNLRIHGLKHLNSARNHISIFASKNVDISNVHINAPENSPNTDGIDICASKNVHIHDSFIGTGDDCIAINAGSSYINITNVQCGPGHGISVGSLGANGADESVKEVLVKNCTLIGTTNGARIKTWEGGSGFASNITFEDIIIQDSRNPIIIDQHYGGNLKRPSVNADSDVKVSNVTYRNVHGTSASDIGINLLCSHHMPCTNIMFEKINLVMSVSGKKIKQLCENVEFGDGSNIRFPCKKR*

Click here to download the sequence:
Link to NCBI Protein BLAST