Transcript Information: S_Transcript_13571.p2


Annotated TAIR IDAT1G21580.1
Annotated Gene NameZinc finger C-x8-C-x5-C-x3-H type family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:7557822-7565655 | Reverse length=2166
E-Value1E-78
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.628348040901
Replicate 25.581100915735
Replicate 34.3008752131717
Condition 2: 8 Hour
Replicate 13.8773436940242
Replicate 25.0402979148791
Replicate 34.7181322762014
Condition 3: 24 Hour
Replicate 14.4035140633214
Replicate 25.1060761258965
Replicate 35.8818206320231


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_13571.p2 GENE.S_Transcript_13571~~S_Transcript_13571.p2 ORF type:3prime_partial len:253 (+),score=39.02,zf-CCCH|PF00642.20|0.075,zf-CCCH|PF00642.20|2e+02,zf-CCCH|PF00642.20|0.26,zf-CCCH|PF00642.20|0.1,zf-CCCH|PF00642.20|0.0078,Torus|PF16131.1|0.59,Torus|PF16131.1|42,Torus|PF16131.1|14,Torus|PF16131.1|0.036,Torus|PF16131.1|0.098,zf-CCCH_3|PF15663.1|0.0012,zf-CCCH_3|PF15663.1|0.27 S_Transcript_13571:7280-8035(+)
ATGTTGGCTAGTGAAAAAGTTCGATGGAGTTTACATACCGCTAGAATGCGACTAGCCAAAAAACGGAAGTTCTGCCAGTTTTTTACTAGATTTGGCGAATGTAAAAAGGGTGAAGGAAGATGTCCTTATATCCACGATCCATCCAAAATAGCTGTCTGCACAAAATTTCTGAATGGTTTCTGCGGTGACCCAAACTGCAAGTTGACTCATAAGGTTATTCCAGAAAGAATGCCTGATTGTTCGTTTTTTCTGCAAGGCTTATGCTCCAATGAGAATTGTCCATACAGACATGTGAATGTGAATCCAAAGGCTTCTATATGCGAAAGCTTCCTCAGGGGCTACTGCGCTGAAGGGAACGAGTGCCAGAAGAAGCACACTTACATCTGCCCCGAGTTTGAAGCCACTGGTAGCTGCGCACAAGGGGCCAAATGCAAATTGTACCATCCCAAGAAAGGAAAGGGTAGCAAGAAAAGGAAATTGTCGAAAGATCAGAGGAATGCAAGAGGACGCTACTTTGGTTCTGAGCTCAAAATGGTTGCTGAGCCTGAGATAGCTTCGGCTGAGAAGCAGGTTGCACCAAAGGAAGAACCTTTATCCTTTCAAGGAGAGTTGGGTGATTTTATCAGCCTCGATGCTAGTGATGATGACACAGAAGAGAAAAGTGATCCAAACAGTGAACCAACGAACCTAACCAAGGGGGATGCATTGAGTTCTCAATTCGATGATCTTGAGGAGTTAATAAAGCCTCTGCGCCTT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_13571.p2 GENE.S_Transcript_13571~~S_Transcript_13571.p2 ORF type:3prime_partial len:253 (+),score=39.02,zf-CCCH|PF00642.20|0.075,zf-CCCH|PF00642.20|2e+02,zf-CCCH|PF00642.20|0.26,zf-CCCH|PF00642.20|0.1,zf-CCCH|PF00642.20|0.0078,Torus|PF16131.1|0.59,Torus|PF16131.1|42,Torus|PF16131.1|14,Torus|PF16131.1|0.036,Torus|PF16131.1|0.098,zf-CCCH_3|PF15663.1|0.0012,zf-CCCH_3|PF15663.1|0.27 S_Transcript_13571:7280-8035(+)
MLASEKVRWSLHTARMRLAKKRKFCQFFTRFGECKKGEGRCPYIHDPSKIAVCTKFLNGFCGDPNCKLTHKVIPERMPDCSFFLQGLCSNENCPYRHVNVNPKASICESFLRGYCAEGNECQKKHTYICPEFEATGSCAQGAKCKLYHPKKGKGSKKRKLSKDQRNARGRYFGSELKMVAEPEIASAEKQVAPKEEPLSFQGELGDFISLDASDDDTEEKSDPNSEPTNLTKGDALSSQFDDLEELIKPLRL

Click here to download the sequence:
Link to NCBI Protein BLAST