Transcript Information: S_Transcript_135956.p1


Annotated TAIR IDAT1G52140.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G16330.1); Has 114 Blast hits to 114 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 114; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:19407559-19408185 | Reverse length=208
E-Value2E-32
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.4993240132496
Replicate 21.1393928879468
Replicate 31.0390273849916
Condition 2: 8 Hour
Replicate 12.0023840673364
Replicate 22.5207716777157
Replicate 34.0029760760528
Condition 3: 24 Hour
Replicate 11.7434883537094
Replicate 22.553668910011
Replicate 33.0787472043804


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_135956.p1 GENE.S_Transcript_135956~~S_Transcript_135956.p1 ORF type:complete len:213 (+),score=35.66,DUF761|PF05553.7|8.1e-07 S_Transcript_135956:107-745(+)
ATGGATCAAAAAATACCAGTGATGGCGAAAAAGATATGGAACATAGTAAGAGTAGCCTTCATCATGCTACGTAAAGGCATATGCAAGAGGAAGATTGTCATGGACCTCAACCTTATGATGAAGCGCGGCAAGATTGCTGGTAAAGCTCTAAGCAATCTCATTCTCCACCACCACCACCACCACGGCGCCGCCACTCAAGTCGGCCCCGATGTCGAGTTCACCACCACCCCCAGTGTCCGTCCAGGAGAGTATGAGTTCAGTTGTAGTAGCACCCCCTTGTACCGCCAATACTTCCCCACCAAGAGAAACAACAAAAACAAACACCACTACAAATACAAACACATGCCCTCGTTTGAGGATCTTGACAACAATAATAATGAGGTGAATATGGAGGCTGTTAGCAAAGTGCTTGAGACTATGGTATCTTCAACATCTTCAGATGATTCTCTTGGAGCTTCACCACTACTAGCCGGGCTCGGGTTTGGGCGGAGCCCCATGCCCACCCGGCAACTTCGGATCACGGACTCACCTTTCCCAGTGCTTCAAAATGGTGATAAGGAAGATCATAAGGTTGATCAAGAAGCTGAAGATTTTATCGAGAGGTTCTACTCCCAGCTGAAGCAGCAAAAGTACTACTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_135956.p1 GENE.S_Transcript_135956~~S_Transcript_135956.p1 ORF type:complete len:213 (+),score=35.66,DUF761|PF05553.7|8.1e-07 S_Transcript_135956:107-745(+)
MDQKIPVMAKKIWNIVRVAFIMLRKGICKRKIVMDLNLMMKRGKIAGKALSNLILHHHHHHGAATQVGPDVEFTTTPSVRPGEYEFSCSSTPLYRQYFPTKRNNKNKHHYKYKHMPSFEDLDNNNNEVNMEAVSKVLETMVSSTSSDDSLGASPLLAGLGFGRSPMPTRQLRITDSPFPVLQNGDKEDHKVDQEAEDFIERFYSQLKQQKYY*

Click here to download the sequence:
Link to NCBI Protein BLAST