Transcript Information: S_Transcript_135958.p1


Annotated TAIR IDAT1G52140.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G16330.1); Has 114 Blast hits to 114 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 114; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:19407559-19408185 | Reverse length=208
E-Value5E-18
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.29406631199094
Replicate 20.48757545983458
Replicate 30.10189356952266
Condition 2: 8 Hour
Replicate 10.94255868805008
Replicate 21.4832164844018
Replicate 32.3553422767935
Condition 3: 24 Hour
Replicate 11.2068996403643
Replicate 21.1269298573874
Replicate 31.1147864930438


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_135958.p1 GENE.S_Transcript_135958~~S_Transcript_135958.p1 ORF type:3prime_partial len:181 (+),score=26.37 S_Transcript_135958:101-640(+)
ATGGATCAAAACATACCAGTGATGGCAAAGAAGATATGGAACAAAGTAAGAGTAGCCTTCATCATACTACGTAAAGGCATATGCAAGAGGAAGATTGTCATGGACCTCAACCTTATGATGAAGCGCGGCAAGATTGCTGGTAAAGCTCTAAGCAATCTCATTCTCCACCACCACCACCACCACGGCGCCGCCACTCAAGTCGGCCACGATGTCGAGTCCACCACCACCCCCGGTGTCCGTCCAGGAGAGTATGAGTTCAGTTGTAGTAGCACCCCCTTGTACCGCCAATACTTCCCCACCAAGAGAAACAACAAAAACAAACACATGCCCTCATTTCAGGATCTCCACAACAATAATAATGAGGTGAATATGGAGGCTGTTAGTAAAGTGCTTGAAACAATGGTATCCTCAACATCTTCTGATGATTCTTCTCTTGAAGCTTCACCACTATTACCCGGCCTCGGGTTCGGGCGGAGCCCCATGCCCACCCGGCAACTTCGGATCACGGACTCACCTTTCCCAGTGCTTCAAAATGGTGAT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_135958.p1 GENE.S_Transcript_135958~~S_Transcript_135958.p1 ORF type:3prime_partial len:181 (+),score=26.37 S_Transcript_135958:101-640(+)
MDQNIPVMAKKIWNKVRVAFIILRKGICKRKIVMDLNLMMKRGKIAGKALSNLILHHHHHHGAATQVGHDVESTTTPGVRPGEYEFSCSSTPLYRQYFPTKRNNKNKHMPSFQDLHNNNNEVNMEAVSKVLETMVSSTSSDDSSLEASPLLPGLGFGRSPMPTRQLRITDSPFPVLQNGD

Click here to download the sequence:
Link to NCBI Protein BLAST