Transcript Information: S_Transcript_13613.p1


Annotated TAIR IDAT5G38510.1
Annotated Gene NameRhomboid-related intramembrane serine protease family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:15417839-15420002 | Reverse length=434
E-Value1E-46
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 172.551135674984
Replicate 2124.50201861071
Replicate 3137.83817214482
Condition 2: 8 Hour
Replicate 188.123074448953
Replicate 271.865261476537
Replicate 359.749960517348
Condition 3: 24 Hour
Replicate 1165.28174924114
Replicate 2116.80579812425
Replicate 3143.49403109249


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_13613.p1 GENE.S_Transcript_13613~~S_Transcript_13613.p1 ORF type:3prime_partial len:325 (+),score=42.10,Rhomboid|PF01694.18|1.1e+03,Rhomboid|PF01694.18|4.8e-14 S_Transcript_13613:909-1880(+)
ATGTCTTGTATTCCACCATTACGCAGAAGCTTTAGTTCCGAATCTCATGTCATTCATGAGGGTCTCAGTTGCATTTCTACTGCACCCAGCAACTCCAGCAGTAAGCCTGTTGGTATTTTAGCAGCTAGCGAGAGAGTGAACTTGAACAGAAGAATTCAGTTATTACGAGAAGGTAACAACTGTGGAAGAAGGACAAAGACTTTGCTTATAAGGAATGAAGCTCCTGATATGTCAAGTGCAACATGCAAGTCGAAGATAAACCCCTCAACAGAGGTTTTATCTCCTATCTATTATGCCTCGGAGTCTAATTCTGTAGACCAGAATCAGAGATCCTTGGACGCAAACCTTGAAAAACTTGAGATTCATACCGACCAGATCGATGATCAAGCAAGAAAGGAATTGGAGTCTTTGGAAAGATATCTTGACACACTTAAAAAAGATGGAGAGACAAGACTACCTGTTTCTGGCAGGAGTATGTCAAACGCGTCCAAAGACTTGGCTAATGGCGATATTGAAATTGAAAGCAGCCAAACAAGGGAACTGAAAGGGTATTCAGGGCCAAGACACAAGAAAAGCAATATTTATGTTACCAAGTCTGTGTCATCTCCGGTGTATGATGAAAAAGAGAGTCGCAATTTATACCTAATAAGTATCTTACTGGCAATAAATATCGCGGTGTTCCTATTTGAGATAGCGAGCCCTGTAAGGAGTTCTGACTATAATCTCTATTCGTTGCCGCTGATGTATGGTGCCAAGGTTAATGATCTGATCATGGTTGGAGAATGGTGGAGGCTTGTGACACCAATGTTTCTGCATTCAGGACTTCTTGACATTGGGCTTAGCTCTGGGGTGCTCCTTTCTTTTGGTCCTCAAGTTTGCAAAGGATATGGTACCTTGACATTCCTCTTGATATACATCCTGGGAGGAATTTCTGGAAACTTTGCAAGCTTCCTTCATACCTCGGAGCCCACC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_13613.p1 GENE.S_Transcript_13613~~S_Transcript_13613.p1 ORF type:3prime_partial len:325 (+),score=42.10,Rhomboid|PF01694.18|1.1e+03,Rhomboid|PF01694.18|4.8e-14 S_Transcript_13613:909-1880(+)
MSCIPPLRRSFSSESHVIHEGLSCISTAPSNSSSKPVGILAASERVNLNRRIQLLREGNNCGRRTKTLLIRNEAPDMSSATCKSKINPSTEVLSPIYYASESNSVDQNQRSLDANLEKLEIHTDQIDDQARKELESLERYLDTLKKDGETRLPVSGRSMSNASKDLANGDIEIESSQTRELKGYSGPRHKKSNIYVTKSVSSPVYDEKESRNLYLISILLAINIAVFLFEIASPVRSSDYNLYSLPLMYGAKVNDLIMVGEWWRLVTPMFLHSGLLDIGLSSGVLLSFGPQVCKGYGTLTFLLIYILGGISGNFASFLHTSEPT

Click here to download the sequence:
Link to NCBI Protein BLAST