Transcript Information: S_Transcript_136149.p1


Annotated TAIR IDAT2G38910.1
Annotated Gene Namecalcium-dependent protein kinase 20
Annotated Gene Symbol(s)CPK20
Annotation TypeOrtholog
Chromosome Positionchr2:16245214-16247483 | Reverse length=583
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.7088233400094
Replicate 22.2062789557515
Replicate 32.9640111562929
Condition 2: 8 Hour
Replicate 13.6177001430851
Replicate 22.5168329719692
Replicate 32.0935207469178
Condition 3: 24 Hour
Replicate 13.3937586851459
Replicate 22.6306209865403
Replicate 32.5672438055208


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_136149.p1 GENE.S_Transcript_136149~~S_Transcript_136149.p1 ORF type:complete len:560 (+),score=95.12,Pkinase|PF00069.21|3.1e-73,EF-hand_1|PF00036.28|1.3e-07,EF-hand_1|PF00036.28|2.9e-05,EF-hand_1|PF00036.28|1.7e-06,EF-hand_1|PF00036.28|1.9e-08,EF-hand_7|PF13499.2|1.1e-12,EF-hand_7|PF13499.2|5.2e-13,Pkinase_Tyr|PF07714.13|8.9e-27,Pkinase_Tyr|PF07714.13|5.5e+03,EF-hand_6|PF13405.2|1.1e-06,EF-hand_6|PF13405.2|0.083,EF-hand_6|PF13405.2|3.8e-07,EF-hand_6|PF13405.2|0.0017,EF-hand_8|PF13833.2|0.0071,EF-hand_8|PF13833.2|4.1e-09,EF-hand_8|PF13833.2|0.096,EF-hand_8|PF13833.2|1.7e-11,EF-hand_5|PF13202.2|1.8e-05,EF-hand_5|PF13202.2|0.0098,EF-hand_5|PF13202.2|0.00015,EF-hand_5|PF13202.2|0.0021,EF-hand_4|PF12763.3|2.5e+02,EF-hand_4|PF12763.3|0.0042,EF-hand_4|PF12763.3|0.02,EF-hand_9|PF14658.2|0.00023,EF-hand_9|PF14658.2|1.2 S_Transcript_136149:266-1945(+)
ATGGGGAACACATGCACGGGGCCCACAGCAGGGAAAACCGGGTTTCTACAATCGGTATCAGCCGCAGTATGGCGTTCACGTCCACCGGAAACCACCCTCCCGCCGGATTCCAACCATTCCGACGCCACCTCTAATTCCCGTCATTCCGATACCGCCTCCTCCGTCCAAAAATCCCCCCCTGAACAAATGACCATCCCGCCCTCCCCCAAAAGCAGCAACCCTAACCCCAAACCCAAGCACGTGCGGCGCGTATCGAGCGCGGGTCTCCAGGTGGACTCAGTCCTGGGCAGGAAAACGGGCAACATCAAGGACGTGTACAGCCTGGGCAGGAAGCTCGGGCAGGGTCAGTTCGGGACCACCTTCTTGTGCGTCGAGAAGTCCACCGGCAAGGAGTTCGCGTGCAAGTCAATCGCCAAGAGGAAGCTGACGTCACCCGAGGATGTTGAGGACGTCAGACGGGAGATCCAGATCATGCACCACTTGGCGGGTCACCCGAATGTTATTCAGATTGTTGGTGCTTACGAGGATGCTGTGGCTGTCCACGTGGTCATGGAGTTGTGTGCCGGCGGTGAGCTGTTCGATCGGATTATCCAACGTGGACATTATACGGAACGGAAAGCTGCTGAGCTGGCTAGGGTTATTGTTGGGGTTGTTGAGGCTTGTCATTCGTTGGGTGTCTTGCATAGGGATTTGAAGCCGGAGAATTTCTTGTTTGTTGGGCATGATGAGGAGTCTCTTCTTAAGACTATTGATTTTGGACTCTCTGTCTTCTTTAAACCAGGTGAAACATTCACAGATGTAGTGGGAAGTCCTTATTACGTGGCTCCTGAAGTTTTAAGGAAATTTTATGGTCAAGAATGTGATGTTTGGAGTGCAGGTGTGATCATCTATATATTACTAAGTGGTGTGCCCCCATTTTGGGATGAATCTGAACAAGGAATATTTGAGCAAGTTTTGAAAGGTGATCTTGATTTTATATCTGAACCATGGCCTAGTATATCTGATAGTGCAAAGGACCTTGTCAAAAGAATGCTTGTAAGGGACCCTAAGAAGCGGCTTACAGCGCATCAAGTACTCTGTCATCCCTGGGTGCAGGTTGATGGAGTGGCACCAGACAAGCCGCTTGATTCTGCAGTTCTTACTCGTTTGAAACAATTTTCTGCCATGAACAAGCTTAAAAAGATAGCCATAAGGGTAATTGCAGAGAGCCTTTCTGAAGAAGAAATTGCAGGCCTGAAACAGATGTTCAAAATGATTGATACTGATAATAGTGGACAAATCACCCTTGAGGAGCTTAAAAAGGGATTGGAAAAAGTTGGTGCCAATCTTAAGGATTCTGAAATAGTTGGGTTGATGCAAGCAGCAGATATCGACAATAGTGGTACAATAGATTACAGTGAGTTTGTTGCTGCAATGCTTCATCTAAATAAAATACAGAAGGAGGATCATCTTTATGCAGCGTTCTCATATTTTGACAAAGATGGTAGTGGGTACATCACCCCTGACGAGCTCCAACATGCTTGTGAGCAGTTTGGTTTGGGAGATGTGCAGTTGGATGAGATTATTCGCGAAGTTGATCAAGATAATGATGGACGGATTGACTACAGCGAATTTGTGGCCATGATGCAAGATAATGCTTTTGGCATGAAGGGTATATCAAATAACCTGAGGTTGGGATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_136149.p1 GENE.S_Transcript_136149~~S_Transcript_136149.p1 ORF type:complete len:560 (+),score=95.12,Pkinase|PF00069.21|3.1e-73,EF-hand_1|PF00036.28|1.3e-07,EF-hand_1|PF00036.28|2.9e-05,EF-hand_1|PF00036.28|1.7e-06,EF-hand_1|PF00036.28|1.9e-08,EF-hand_7|PF13499.2|1.1e-12,EF-hand_7|PF13499.2|5.2e-13,Pkinase_Tyr|PF07714.13|8.9e-27,Pkinase_Tyr|PF07714.13|5.5e+03,EF-hand_6|PF13405.2|1.1e-06,EF-hand_6|PF13405.2|0.083,EF-hand_6|PF13405.2|3.8e-07,EF-hand_6|PF13405.2|0.0017,EF-hand_8|PF13833.2|0.0071,EF-hand_8|PF13833.2|4.1e-09,EF-hand_8|PF13833.2|0.096,EF-hand_8|PF13833.2|1.7e-11,EF-hand_5|PF13202.2|1.8e-05,EF-hand_5|PF13202.2|0.0098,EF-hand_5|PF13202.2|0.00015,EF-hand_5|PF13202.2|0.0021,EF-hand_4|PF12763.3|2.5e+02,EF-hand_4|PF12763.3|0.0042,EF-hand_4|PF12763.3|0.02,EF-hand_9|PF14658.2|0.00023,EF-hand_9|PF14658.2|1.2 S_Transcript_136149:266-1945(+)
MGNTCTGPTAGKTGFLQSVSAAVWRSRPPETTLPPDSNHSDATSNSRHSDTASSVQKSPPEQMTIPPSPKSSNPNPKPKHVRRVSSAGLQVDSVLGRKTGNIKDVYSLGRKLGQGQFGTTFLCVEKSTGKEFACKSIAKRKLTSPEDVEDVRREIQIMHHLAGHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAAELARVIVGVVEACHSLGVLHRDLKPENFLFVGHDEESLLKTIDFGLSVFFKPGETFTDVVGSPYYVAPEVLRKFYGQECDVWSAGVIIYILLSGVPPFWDESEQGIFEQVLKGDLDFISEPWPSISDSAKDLVKRMLVRDPKKRLTAHQVLCHPWVQVDGVAPDKPLDSAVLTRLKQFSAMNKLKKIAIRVIAESLSEEEIAGLKQMFKMIDTDNSGQITLEELKKGLEKVGANLKDSEIVGLMQAADIDNSGTIDYSEFVAAMLHLNKIQKEDHLYAAFSYFDKDGSGYITPDELQHACEQFGLGDVQLDEIIREVDQDNDGRIDYSEFVAMMQDNAFGMKGISNNLRLG*

Click here to download the sequence:
Link to NCBI Protein BLAST