Transcript Information: S_Transcript_13615.p1


Annotated TAIR IDAT5G38510.1
Annotated Gene NameRhomboid-related intramembrane serine protease family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:15417839-15420002 | Reverse length=434
E-Value3.4E-53
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 131.444284536336
Replicate 231.702531456491
Replicate 345.964973008358
Condition 2: 8 Hour
Replicate 132.414593282042
Replicate 235.932630738269
Replicate 319.741754243383
Condition 3: 24 Hour
Replicate 156.124546814296
Replicate 243.096109397485
Replicate 331.042516190912


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_13615.p1 GENE.S_Transcript_13615~~S_Transcript_13615.p1 ORF type:3prime_partial len:325 (+),score=42.61,Rhomboid|PF01694.18|1.2e+03,Rhomboid|PF01694.18|4.8e-14 S_Transcript_13615:193-1164(+)
ATGTATTGTATTCCAACTTTACGGAGAAGCTTTAGTTCCGACTCTCATGTCATTCGTAAGGGTGTCAGGTGCATTTCTACTGCACGCAGCAACTCCAGCAGTAAGCCTGTTGGTATTTTAGCAGCTAGCGAGAGAGTGAACTTGAACAGAAGAATTCAGTTATTACGAGAAGGTAACAACTGTGGAAGAAGGACAAAGACTTTGCTTATAAGGAATGAAGCTCCTGATATGTCAAGTGCAACATGCAAGTCGAAGATAAACCCCTCAACAGAGGTTTTATCTCCTATCTATTATGCCTCGGAGTCTAATTCTGTTGACGAACATCAGAGATCCTTGGACGCATACCTTGAAAAACTTGAGAGTCATACCGAGCAGATCGATGATCAAGCAAGAAAGGAATTGGAGTCTTTGGAAAGATATCTTGACACACTTAAAGAAGATGCAGAGTCAAGATTATCTATTTCTGGCAGGAGTATGCCAAACGATCTCAAAGACTTGGCTATTGGCGATATTGAAATTGAAAGCAGCCAAACAAGGAAACTGAAAGGGCATTCAGGGCCAAGATACAAGAAAAGCAATATTTATGCTACCAAGTCTGTATCATCTCCCGTGTATGATGAAAAAGAGAGTCGCAATTTATACCTAATAAGTATCTTACTGGCAATAAATATCGCGGTGTTCCTATTTGAGATAGCGAGCCCTGTAAGGAGTTCTGACTATAATCTCTATTCGTTGCCGCTGATGTATGGTGCCAAGGTTAATGATCTGATCATGGTTGGAGAATGGTGGAGGCTTGTGACACCAATGTTTCTGCATTCAGGACTTCTTGACATTGGGCTTAGCTCTGGGGTGCTCCTTTCTTTTGGTCCTCAAGTTTGCAAAGGATATGGTACCTTGACATTCCTCTTGATATACATCCTGGGAGGAATTTCTGGAAACTTTGCAAGCTTCCTTCATACCTCGGAGCCCACC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_13615.p1 GENE.S_Transcript_13615~~S_Transcript_13615.p1 ORF type:3prime_partial len:325 (+),score=42.61,Rhomboid|PF01694.18|1.2e+03,Rhomboid|PF01694.18|4.8e-14 S_Transcript_13615:193-1164(+)
MYCIPTLRRSFSSDSHVIRKGVRCISTARSNSSSKPVGILAASERVNLNRRIQLLREGNNCGRRTKTLLIRNEAPDMSSATCKSKINPSTEVLSPIYYASESNSVDEHQRSLDAYLEKLESHTEQIDDQARKELESLERYLDTLKEDAESRLSISGRSMPNDLKDLAIGDIEIESSQTRKLKGHSGPRYKKSNIYATKSVSSPVYDEKESRNLYLISILLAINIAVFLFEIASPVRSSDYNLYSLPLMYGAKVNDLIMVGEWWRLVTPMFLHSGLLDIGLSSGVLLSFGPQVCKGYGTLTFLLIYILGGISGNFASFLHTSEPT

Click here to download the sequence:
Link to NCBI Protein BLAST