Transcript Information: S_Transcript_136438.p1


Annotated TAIR IDAT5G12010.1
Annotated Gene Nameunknown protein; INVOLVED IN: response to salt stress; LOCATED IN: chloroplast, plasma membrane, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G29780.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:3877975-3879483 | Reverse length=502
E-Value2.7E-197
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.5313036425005
Replicate 20.56907988938034
Replicate 30.58548368519367
Condition 2: 8 Hour
Replicate 10.67699651800422
Replicate 20.62144023999241
Replicate 30.76128027160648
Condition 3: 24 Hour
Replicate 10.47677325078678
Replicate 20.6295503215652
Replicate 31.0008747779808


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_136438.p1 GENE.S_Transcript_136438~~S_Transcript_136438.p1 ORF type:complete len:504 (+),score=34.14,DDE_Tnp_4|PF13359.2|4.1e-40 S_Transcript_136438:84-1595(+)
ATGGAAATCACTTGTTTCCCATTTCTTCCATCTGAAGATTTCTCACCCCAATTCTACTCTTCTCCTTACCCCGAACTCGAACCCCCCATTACTACTCAGCCTGCTTTGAAAAAGCGTCGTAAAGACGACCACTTGGTGATTGATGACAGTACCAATTCGACGGCCATTAAGGAGATTTTAGCTTCTCTGCTGATGCTAGATGAGGACGACAATAAGGTAGGAGACAACAATCAGATCAATTATAATAATAATAATAATAATAATTGGTTGATTAGTAGTAGTGCGGGTGATCTGAAGGAGGAGCAGATAGGCAACAATCGGACCACCGTTATGAATAACAACGAGTCGTCGGAGATTAAACAGAGTGGTGGTAACAAGCGATCGAGAACTGCTACCACGACAACAATGGCGGCGACTGAAGGAGCAGGGGGTGGGGGCGGCCACCAGAGGAGGCTTTGGGTGAAGGACAGGTCTAAGGACTGGTGGGACAAGTTCAGCCACCGGGATTTACCAGACGAGGAGTTCCGAAAAGCATTTCGAATGAGCAAAGCAACCTTCGAAATGATCTGCGATGAGCTGGACCCAATCATCACCAAAAAGGACACCATGCTACGAACCGCCATCCCTGTTCGCCAGCGAGTCGCTGTCTGTGTGTCGCGACTCGCTACAGGCGAACCGCTTCGGCTTTTATCGAAGCGGTTTGGGTTGGGGATCTCCACCTGCCACAAACTGGTGCTCGAGGTCTGCGCTGCGATCAAAACCGCCCTGATGCCGAAATTCCTCCAGTGGCCGGACCAAGCCCGATTGGACCGGATCAAGGAGGAATTCGAGGCCGGTTCGGGGATCCCAAACGTGGGGGGTTCCATGTACACGACCCACATACCCATCATCGCCCCGAAGATCAGCGTAGCAGCATACTTCAACAAGCGCCACACAGAACGCAACCAAAAGACCAGCTATTCAATCACAGTCCAAGGAGTGGTCGACCCGAATGGCATCTTCACGGATGTTTGTATCGGGTGGCCCGGATCCATGCCCGACGACCAAGTGCTGGAAAAATCGGCCCTCTTCCAACGGGCGAACCGGGGTTTATTAAACAACGTTTGGATGGTGGGGACATCCGGTTTTCCCTTAATGGACTGGGTTTTGGTTCCTTACACCCACCCGAATCTCACCTGGACCCAACACGCCTTCAATGAGAAGATTGGGGAAGTCCAAAATGTTGCAAGAAGGGCATTTGCGAAATTAAAGGCAAGATGGGGTTGCTTGCAAAAGAGAACTGAAGTGAAACTCCAAGACTTGCCTGTAGTCTTAGGAGCTTGCTGTGTTCTCCACAACATCTGTGAGTCTAGAAATGAAGTTGTTGATACCGAGCTTTTCGAGACGTTTGAGCTTTTCGACGACGAGATGGTGCCGGAAAATTCCATCCGATCGGCCACGGCGGTTCAGGCGAGAGACCACATTGCCCATAATCTCTTGCATCATGGCTTGGCTGGCACTTCTATTCTCTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_136438.p1 GENE.S_Transcript_136438~~S_Transcript_136438.p1 ORF type:complete len:504 (+),score=34.14,DDE_Tnp_4|PF13359.2|4.1e-40 S_Transcript_136438:84-1595(+)
MEITCFPFLPSEDFSPQFYSSPYPELEPPITTQPALKKRRKDDHLVIDDSTNSTAIKEILASLLMLDEDDNKVGDNNQINYNNNNNNNWLISSSAGDLKEEQIGNNRTTVMNNNESSEIKQSGGNKRSRTATTTTMAATEGAGGGGGHQRRLWVKDRSKDWWDKFSHRDLPDEEFRKAFRMSKATFEMICDELDPIITKKDTMLRTAIPVRQRVAVCVSRLATGEPLRLLSKRFGLGISTCHKLVLEVCAAIKTALMPKFLQWPDQARLDRIKEEFEAGSGIPNVGGSMYTTHIPIIAPKISVAAYFNKRHTERNQKTSYSITVQGVVDPNGIFTDVCIGWPGSMPDDQVLEKSALFQRANRGLLNNVWMVGTSGFPLMDWVLVPYTHPNLTWTQHAFNEKIGEVQNVARRAFAKLKARWGCLQKRTEVKLQDLPVVLGACCVLHNICESRNEVVDTELFETFELFDDEMVPENSIRSATAVQARDHIAHNLLHHGLAGTSIL*

Click here to download the sequence:
Link to NCBI Protein BLAST