Transcript Information: S_Transcript_136439.p1


Annotated TAIR IDAT5G12010.1
Annotated Gene Nameunknown protein; INVOLVED IN: response to salt stress; LOCATED IN: chloroplast, plasma membrane, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G29780.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:3877975-3879483 | Reverse length=502
E-Value1.1E-176
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.38649586856071
Replicate 21.2358824025994
Replicate 30.95657344831953
Condition 2: 8 Hour
Replicate 10.7963838707643
Replicate 20.46414623733873
Replicate 30.75180375370266
Condition 3: 24 Hour
Replicate 10.18128534017091
Replicate 20.47020355967526
Replicate 30.5756068225234


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_136439.p1 GENE.S_Transcript_136439~~S_Transcript_136439.p1 ORF type:internal len:482 (+),score=29.98,DDE_Tnp_4|PF13359.2|3.7e-40 S_Transcript_136439:1-1443(+)
CAAATTCACAAATTCATTCACATTTCACATTTTTTTGTTCCCCGAATCTTTTTTTGTTTCGATTCAATTCATTTCATGGAAATCACTTGTTTCCCATTTCTTCCATCTGAAGATTTCTCACCCCAATTCTACTCTTCTCCTTACCCCGAACTCGAACCCCCCATTACTACTCAGCCTGCTTTGAAAAAGCGTCGTAAAGACGACCACTTGGTGATTGATGACAGTACCAATTCGACGGCCATTAAGGAGATTTTAGCTTCTCTGCTGATGCTAGATGAGGACGACAATAAGGTAGGAGACAACAATCAGATCAATTATAATAATAATAATAATAATAATTGGTTGATTAGTAGTAGTGCGGGTGATCTGAAGGAGGAGCAGATAGGCAACAATCGGACCACCGTTATGAATAACAACGAGTCGTCGGAGATTAAACAGAGTGGTGGTAACAAGCGATCGAGAACTGCAACCACGACAACAATGGCGGCAACTGAAGGAGCAGGGGGTGGGGGTGGCCACCAGAGGAGGCTTTGGGTGAAGGACAGGTCTAAGGACTGGTGGGACAAGTTCAGCCACCGGGATTTACCAGACGAGGAGTTCCGAAAAGCATTTCGAATGAGCAAAGCAACCTTCGAAATGATCTGCGATGAGCTGGACCCAATCATCACCAAAAAGGACACCATGCTACGAACCGCCATCCCTGTTCGCCAGCGAGTCGCTGTCTGTGTGTCGCGACTGGCTACAGGCGAACCGCTCCGGCTTTTGTCGAAGCGGTTCGGGTTGGGGATCTCCACCTGCCACAAACTGGTGCTCGAGGTCTGCGCTGCGATCAAAACCGCCCTGATGCCGAAATTCCTCCAGTGGCCGGACCAAGCCCGATTGGACCGGATCAAGGAGGAATTCGAGGCCGGTTCGGGGATCCCAAACGTGGGGGGTTCCATGTACACGACCCACATACCCATCATCGCCCCGAAGATCAGCGTAGCAGCATACTTCAACAAGCGCCACACAGAACGCAACCAAAAGACCAGCTATTCAATCACAGTCCAAGGAGTGGTCGACCCGAATGGCATCTTCACGGATGTTTGTATCGGGTGGCCCGGATCCATGCCCGACGACCAAGTGCTGGAAAAATCGGCCCTCTTCCAACGGGCGAACCGGGGTTTATTAAACAACGTTTGGATGGTGGGGACATCCGGTTTTCCCTTAATGGACTGGGTTTTGGTTCCTTACACCCACCCGAATCTCACCTGGACCCAACACGCCTTCAATGAGAAGATTGGGGAAGTCCAAAATGTTGCAAGAAGGGCATTTGCGAAATTAAAGGCAAGATGGGGTTGCTTGCAAAAGAGAACTGAAGTGAAACTCCAAGACTTGCCTGTAGTCTTAGGAGCTTGCTGTGTTCTCCACAACATCTGTGAGTCTAGAAATGAAGTTGTTGAT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_136439.p1 GENE.S_Transcript_136439~~S_Transcript_136439.p1 ORF type:internal len:482 (+),score=29.98,DDE_Tnp_4|PF13359.2|3.7e-40 S_Transcript_136439:1-1443(+)
QIHKFIHISHFFVPRIFFCFDSIHFMEITCFPFLPSEDFSPQFYSSPYPELEPPITTQPALKKRRKDDHLVIDDSTNSTAIKEILASLLMLDEDDNKVGDNNQINYNNNNNNNWLISSSAGDLKEEQIGNNRTTVMNNNESSEIKQSGGNKRSRTATTTTMAATEGAGGGGGHQRRLWVKDRSKDWWDKFSHRDLPDEEFRKAFRMSKATFEMICDELDPIITKKDTMLRTAIPVRQRVAVCVSRLATGEPLRLLSKRFGLGISTCHKLVLEVCAAIKTALMPKFLQWPDQARLDRIKEEFEAGSGIPNVGGSMYTTHIPIIAPKISVAAYFNKRHTERNQKTSYSITVQGVVDPNGIFTDVCIGWPGSMPDDQVLEKSALFQRANRGLLNNVWMVGTSGFPLMDWVLVPYTHPNLTWTQHAFNEKIGEVQNVARRAFAKLKARWGCLQKRTEVKLQDLPVVLGACCVLHNICESRNEVVD

Click here to download the sequence:
Link to NCBI Protein BLAST