Transcript Information: S_Transcript_136447.p2


Annotated TAIR IDAT5G44710.1
Annotated Gene NameCONTAINS InterPro DOMAIN/s: Ribosomal protein S27/S33, mitochondrial (InterPro:IPR013219); Has 101 Blast hits to 101 proteins in 55 species: Archae - 0; Bacteria - 0; Metazoa - 8; Fungi - 59; Plants - 26; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:18041621-18042322 | Forward length=102
E-Value2.2E-51
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 1107.9873703966
Replicate 289.099727059194
Replicate 3101.257714459
Condition 2: 8 Hour
Replicate 1107.65221073553
Replicate 2106.48139496793
Replicate 389.772512028671
Condition 3: 24 Hour
Replicate 193.260848748306
Replicate 299.372096911677
Replicate 3117.13699468914


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_136447.p2 GENE.S_Transcript_136447~~S_Transcript_136447.p2 ORF type:complete len:104 (-),score=24.17,MRP-S33|PF08293.7|4.9e-15 S_Transcript_136447:274-585(-)
ATGAATGCGGTGGCAGGAGGTCTAAGGAGTGCCATAGGAGAAGCTGTGGTGAGAGGAGTGACAGAGGCTAGAGCTCGCATATTCGGTCATGTATTGAATCCAACAGCCCAAAGATCTGCTCACAAAGTTCTGAGAAAGAAGCTCATTGGTGACAAAGTTGCTCAGTGGTATCCTTATGACCTTAAACACGATGATCCTCTTATCATGGCGCAACTTGAACAAGAACGCCTGAATAAGCTCGAGATGTTGAAGCGTCGTGGAAAGGGACCTCCAAAGAAGGGACAGGGAAAGCGTGCTTCTAAACGCAAGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_136447.p2 GENE.S_Transcript_136447~~S_Transcript_136447.p2 ORF type:complete len:104 (-),score=24.17,MRP-S33|PF08293.7|4.9e-15 S_Transcript_136447:274-585(-)
MNAVAGGLRSAIGEAVVRGVTEARARIFGHVLNPTAQRSAHKVLRKKLIGDKVAQWYPYDLKHDDPLIMAQLEQERLNKLEMLKRRGKGPPKKGQGKRASKRK*

Click here to download the sequence:
Link to NCBI Protein BLAST