Transcript Information: S_Transcript_136618.p1


Annotated TAIR IDATMG00300.1
Annotated Gene NameGag-Pol-related retrotransposon family protein
Annotated Gene Symbol(s)ORF145A
Annotation TypeHomolog
Chromosome PositionchrM:89617-90054 | Reverse length=145
E-Value1E-08
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 114.734236735357
Replicate 29.9424588134723
Replicate 311.635545941156
Condition 2: 8 Hour
Replicate 18.9694774724422
Replicate 29.5056352589396
Replicate 38.2335892036409
Condition 3: 24 Hour
Replicate 112.094377554878
Replicate 215.465862835362
Replicate 313.531139702315


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_136618.p1 GENE.S_Transcript_136618~~S_Transcript_136618.p1 ORF type:internal len:233 (+),score=17.67,gag_pre-integrs|PF13976.2|1e-15 S_Transcript_136618:1-696(+)
AGCTCTCTTTCTCTCCTGCCAGAGCTCCGGTGTGGACTCCATTTCCGGCTAGCTCTTGGCTCATGCCTTCTCCAATGTCTTGCAAATTCGGGAGCAAGCAAGCACGTAGTTCATGATAGAGAAGCCTTTGTGGACTATCATCGTCTGCCGGTGGGTTCACAAACTGTCGTATTAGGGAACGGCAGCGAGGAAAACGTCCTTGGGATTGGGACTTACAAGCTCAAGCTGCGTGGAGGAAATGAGTTGCTCCTGCATGATACCCTCTATGCACCTGGGGTGCTATGTTGTTTGCTTTCAGTAGTTTCATTATTAACACTTGGTTTCTCTTTTAATTTTCATTCACGTGGTTTGGACATCTTGTACCATGACAATTTGTTTGGTCATGGAATTTTGAAGGACGGTTTTTTCGTACTTGATTTAGTTTATAATAAATCCTCGTTTGCTTTAGTTACGCAATTTGATAGTAATTCTGAATCTGTTTTATGGCATTCTAGGCTTGGTCACATAGGACAAGATAGAATGAATAGACTGGCAAAAGATGGTCTTTTAGACCGTCTCACCAAGGTTAAGTTGCCTAGGTGTGAGCCATGTTTAGCTGGCAAGGCTAGTAAGAAGCCTTTCGGTAAGGCTTCAAGGGCATCTAGTCCCTTAGAGTTAATCCACTCGGATATTTGCGGGCCAATGAACGTCAAAGCA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_136618.p1 GENE.S_Transcript_136618~~S_Transcript_136618.p1 ORF type:internal len:233 (+),score=17.67,gag_pre-integrs|PF13976.2|1e-15 S_Transcript_136618:1-696(+)
SSLSLLPELRCGLHFRLALGSCLLQCLANSGASKHVVHDREAFVDYHRLPVGSQTVVLGNGSEENVLGIGTYKLKLRGGNELLLHDTLYAPGVLCCLLSVVSLLTLGFSFNFHSRGLDILYHDNLFGHGILKDGFFVLDLVYNKSSFALVTQFDSNSESVLWHSRLGHIGQDRMNRLAKDGLLDRLTKVKLPRCEPCLAGKASKKPFGKASRASSPLELIHSDICGPMNVKA

Click here to download the sequence:
Link to NCBI Protein BLAST