Transcript Information: S_Transcript_136796.p2


Annotated TAIR IDAT1G27590.1
Annotated Gene NameCONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3453 (InterPro:IPR021850); BEST Arabidopsis thaliana protein match is: phosphatidylinositol 3- and 4-kinase family protein (TAIR:AT1G27570.1); Has 109 Blast hits to 109 proteins in 38 species: Archae - 0; Bacteria - 0; Metazoa - 65; Fungi - 4; Plants - 38; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:9592293-9593912 | Forward length=264
E-Value3E-34
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.0945350273466
Replicate 22.0523525169781
Replicate 33.0023058740745
Condition 2: 8 Hour
Replicate 14.6287668905405
Replicate 23.4685036650739
Replicate 34.1309782180196
Condition 3: 24 Hour
Replicate 14.7415250987336
Replicate 22.9867038511466
Replicate 34.3014339295547


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_136796.p2 GENE.S_Transcript_136796~~S_Transcript_136796.p2 ORF type:complete len:129 (-),score=20.53,DUF3453|PF11935.4|1.8e-24 S_Transcript_136796:100-486(-)
ATGCGGAAGAGGAAAATGGCTTGGCAGTTTCATCACCATGGTAAGGTTGATAGATGGGCTGAGGAAATCTGGATTCAGATGATTGAGTTCAAGGATGTTGTTTTTTCTCTTGTTTTTGAGCCGGTTTCCATGGGGACAAGGTTATTGGCATTTAAGTTCTTGGAAACTTGTATATTAATGTTTACGCCAGATACAAGCGAATCTGACAGACCAACCTTTGGAGGCAATGAACGCAGGTTCAATGTTTCGTGGCTCACTAGTGGCCACCCAACTCTAGATCCAACAAAACTCAAATCAGAAGCTAATATGTTATTAACCAATTTATTAGATATGTTGCAATCATCGAGCAGTCTTCCTGGTCCAGTGACAATTGCCATTGTCAATTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_136796.p2 GENE.S_Transcript_136796~~S_Transcript_136796.p2 ORF type:complete len:129 (-),score=20.53,DUF3453|PF11935.4|1.8e-24 S_Transcript_136796:100-486(-)
MRKRKMAWQFHHHGKVDRWAEEIWIQMIEFKDVVFSLVFEPVSMGTRLLAFKFLETCILMFTPDTSESDRPTFGGNERRFNVSWLTSGHPTLDPTKLKSEANMLLTNLLDMLQSSSSLPGPVTIAIVN*

Click here to download the sequence:
Link to NCBI Protein BLAST