Transcript Information: S_Transcript_136823.p1


Annotated TAIR IDAT1G23450.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:8324698-8326697 | Forward length=666
E-Value4.5E-235
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.61179313184323
Replicate 21.0460805393649
Replicate 30.66245460070404
Condition 2: 8 Hour
Replicate 12.4205543607091
Replicate 22.2500422482484
Replicate 33.0319955645017
Condition 3: 24 Hour
Replicate 11.1299077667549
Replicate 20.68382190101048
Replicate 30.61605568230887


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_136823.p1 GENE.S_Transcript_136823~~S_Transcript_136823.p1 ORF type:5prime_partial len:696 (+),score=118.66,PPR_2|PF13041.2|0.0051,PPR_2|PF13041.2|2.5e-06,PPR_2|PF13041.2|2e+02,PPR_2|PF13041.2|0.00041,PPR_2|PF13041.2|3.6e+03,PPR_2|PF13041.2|2.5e-07,PPR_2|PF13041.2|4.9e+03,PPR_2|PF13041.2|0.0035,PPR_2|PF13041.2|99,PPR_2|PF13041.2|2.4e-08,PPR_2|PF13041.2|0.017,PPR_2|PF13041.2|9.6,PPR|PF01535.16|0.023,PPR|PF01535.16|5.7e-05,PPR|PF01535.16|76,PPR|PF01535.16|6.5,PPR|PF01535.16|0.0085,PPR|PF01535.16|6.3e+02,PPR|PF01535.16|1.2e+03,PPR|PF01535.16|2.4e-05,PPR|PF01535.16|1.6e+04,PPR|PF01535.16|1.9e+02,PPR|PF01535.16|0.89,PPR|PF01535.16|0.67,PPR|PF01535.16|0.00035,PPR|PF01535.16|0.074,PPR|PF01535.16|0.0094,PPR|PF01535.16|1.9e+03,PPR_3|PF13812.2|0.019,PPR_3|PF13812.2|0.037,PPR_3|PF13812.2|8.5e+02,PPR_3|PF13812.2|0.53,PPR_3|PF13812.2|4.5e+03,PPR_3|PF13812.2|0.17,PPR_3|PF13812.2|1.1e+04,PPR_3|PF13812.2|75,PPR_3|PF13812.2|9,PPR_3|PF13812.2|2.2,PPR_3|PF13812.2|0.16,PPR_3|PF13812.2|2,PPR_1|PF12854.3|0.28,PPR_1|PF12854.3|1.2,PPR_1|PF12854.3|11,PPR_1|PF12854.3|66,PPR_1|PF12854.3|0.0012,PPR_1|PF12854.3|39,PPR_1|PF12854.3|0.61,PPR_1|PF12854.3|4.3,PPR_1|PF12854.3|0.00017 S_Transcript_136823:1-2088(+)
GACGGAAGGGCGAAGGGAAGTAAGTATGCTCCCAAATCAAGCAAAGTTCTGAAAAAAAAAAAAAATCTGTACTATTTGTCAATGAAACTGCTATTATCGTACACCCAAAAACACATTACTACCCTACTCTCACAGCACCCAAAGCCAACTATATCATACCATTGGTTTCATCTAGAACCTTACTACAGAACCAATGTTTCAGATCAAGTCTTATCCTATAACCGGGTCATAGACAATCACATAAAGTCAGGTTCTTTAACCTCTGCCCTCCAAGTGTTCGACGAAATGCCCTTTCGAGATGCAGTCTCATGGAACTTGCTAATTTCTGGGTATAGACGCCATAACATGCCATGCAAAGCCACTCAGTTGTATGCTCAAATGGTCACTCAAGGTTTCAGAGAAAGTCCAGTTACTGTTTCCTCTGTTTTGGGCATTTGTAGCAGCTTTGGCCTTTATTTTGAGGGGATTCAAGTGCATTGTAGAGCTATTTCACTTGGGTTTTGTGGGAACTTGTTTGTTGGTAGTGCAAGTGTGGATCTTTATTTGAATATGGGGTTGGTCGATGATGGGTTGAAAGTGTTGGAGCAGATGCCTGTGAGGAACTTTGCTGTTTGGAATTTGGTTTTGAGGGGGTTTTGTGAGTTGGGTTTGTGGGATCAAGTTTTGGAGTTGTACCCAAGAATTAAATATGATGGGGTTGAGTTGAATGAGCTTATGGTTTGTTACTTGATGCAGGGTTGTGGAAATGGGAGATATTTACATGAAGGAGAACAGTTGCATTGCCATGCTATCAAGGCTGGGTTTGTTGAATCAAATCTGTTTGTTGCCAATGCATTGGTGGATTTTTATTCTGCTTGTGGGAGTTTGAGTGGTGCTCAGAAATCATTCTATGTTATTCCTCATGAGGACGTAATTTCATGGAATTCAATTGTTTCTGCACATGCTCATAATGGGATGTTATTTGATGCCCTTGAGTACTTTAGAAGGATGCAATTTTGTGACATGAAGCCTAGTTTACGTTCATTCGTGGCGCTGTTGAATTCCTGTAGTGAAGGCAAAAATCTTTTTGTAGGAAGGCAGATACATTGTGTTATTTTGAAACTTGGTTTTGATTATGGAAGCATCCATGTTCAGTCTGCTTTGATTGATATGTATGGAAAATGTTATGAGATTGAGAGTTCAGTGGATGTGTATGAGTGGTGTCCTGAGGTATCTAAAGAGTGCTGTAATGCTTTATTGACATCTATGTTGCACTGTACTTTTACTGAGGAGGTGGTTGAGTTGTTTAAATTTATGGTTGATGAGGGAATTGATTTTGATGAAGTATCCTTGTCTACCACACTAAAAGCAATGTCAGGCTCTTCTTTTGCTAGCTTATCAACCTGCAGATTGTTGCATTCTTGTGCTCTTAAATCAGGGTTAGAATCTCATATAGTAGTCTCAGCTTCATTGATTGATTCATATGCTAAACTGGGTCAAGTTGAGCTTTCGCGCCAAGTTTTTGATAACCTTTCGTCACCTAACGTTGTCTGCTTGACTTCAATCATAAATGGGTTTGCCTGGAATGGGTTAGGAAGAGAATGCCTGACATTGCTTGAAACAATGATTCGGAAGGGTTTGAAACCTGATAGAGTGACTTTATTATGTGTCTTGACAGGGTGTAGCCATTCAGGACTTATTGAAGAAGGGAGATGGGTTTTTGATTCAATGAAAACAGTGTATGGGATTGATCCAGACCAACGGCATTATTCATGCATGGTTGATCTCTTAGGACGTGCAGGGTTAGTGAATGAAGCTGAAGAGTTGCTCAAACAGTCACCAGTAAAGGATGATCCTGTCATATGGAGCTCATTGTTGAGAAGTTGTAGGATGCACAAGAATGAAGTAGTTGGACAAGCAGCCGTAAAACGTTTGATGAAACTCGAACATGGAGATCCTGCAGCTTGTCTACAAGCTTCAAGCTTTTATTCTGAAATAGGAGATTCTGAACTGTCTATGCACTACAGAGAGATTGGAATGGCTAGAAAAGTGGTTCGGGAGATCGGTTATAGCTTTATTGATGGAAGTTGCCATAACCTTATGGACTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_136823.p1 GENE.S_Transcript_136823~~S_Transcript_136823.p1 ORF type:5prime_partial len:696 (+),score=118.66,PPR_2|PF13041.2|0.0051,PPR_2|PF13041.2|2.5e-06,PPR_2|PF13041.2|2e+02,PPR_2|PF13041.2|0.00041,PPR_2|PF13041.2|3.6e+03,PPR_2|PF13041.2|2.5e-07,PPR_2|PF13041.2|4.9e+03,PPR_2|PF13041.2|0.0035,PPR_2|PF13041.2|99,PPR_2|PF13041.2|2.4e-08,PPR_2|PF13041.2|0.017,PPR_2|PF13041.2|9.6,PPR|PF01535.16|0.023,PPR|PF01535.16|5.7e-05,PPR|PF01535.16|76,PPR|PF01535.16|6.5,PPR|PF01535.16|0.0085,PPR|PF01535.16|6.3e+02,PPR|PF01535.16|1.2e+03,PPR|PF01535.16|2.4e-05,PPR|PF01535.16|1.6e+04,PPR|PF01535.16|1.9e+02,PPR|PF01535.16|0.89,PPR|PF01535.16|0.67,PPR|PF01535.16|0.00035,PPR|PF01535.16|0.074,PPR|PF01535.16|0.0094,PPR|PF01535.16|1.9e+03,PPR_3|PF13812.2|0.019,PPR_3|PF13812.2|0.037,PPR_3|PF13812.2|8.5e+02,PPR_3|PF13812.2|0.53,PPR_3|PF13812.2|4.5e+03,PPR_3|PF13812.2|0.17,PPR_3|PF13812.2|1.1e+04,PPR_3|PF13812.2|75,PPR_3|PF13812.2|9,PPR_3|PF13812.2|2.2,PPR_3|PF13812.2|0.16,PPR_3|PF13812.2|2,PPR_1|PF12854.3|0.28,PPR_1|PF12854.3|1.2,PPR_1|PF12854.3|11,PPR_1|PF12854.3|66,PPR_1|PF12854.3|0.0012,PPR_1|PF12854.3|39,PPR_1|PF12854.3|0.61,PPR_1|PF12854.3|4.3,PPR_1|PF12854.3|0.00017 S_Transcript_136823:1-2088(+)
DGRAKGSKYAPKSSKVLKKKKNLYYLSMKLLLSYTQKHITTLLSQHPKPTISYHWFHLEPYYRTNVSDQVLSYNRVIDNHIKSGSLTSALQVFDEMPFRDAVSWNLLISGYRRHNMPCKATQLYAQMVTQGFRESPVTVSSVLGICSSFGLYFEGIQVHCRAISLGFCGNLFVGSASVDLYLNMGLVDDGLKVLEQMPVRNFAVWNLVLRGFCELGLWDQVLELYPRIKYDGVELNELMVCYLMQGCGNGRYLHEGEQLHCHAIKAGFVESNLFVANALVDFYSACGSLSGAQKSFYVIPHEDVISWNSIVSAHAHNGMLFDALEYFRRMQFCDMKPSLRSFVALLNSCSEGKNLFVGRQIHCVILKLGFDYGSIHVQSALIDMYGKCYEIESSVDVYEWCPEVSKECCNALLTSMLHCTFTEEVVELFKFMVDEGIDFDEVSLSTTLKAMSGSSFASLSTCRLLHSCALKSGLESHIVVSASLIDSYAKLGQVELSRQVFDNLSSPNVVCLTSIINGFAWNGLGRECLTLLETMIRKGLKPDRVTLLCVLTGCSHSGLIEEGRWVFDSMKTVYGIDPDQRHYSCMVDLLGRAGLVNEAEELLKQSPVKDDPVIWSSLLRSCRMHKNEVVGQAAVKRLMKLEHGDPAACLQASSFYSEIGDSELSMHYREIGMARKVVREIGYSFIDGSCHNLMD*

Click here to download the sequence:
Link to NCBI Protein BLAST