Transcript Information: S_Transcript_136823.p2


Annotated TAIR IDAT1G23460.1
Annotated Gene NamePectin lyase-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:8327382-8329622 | Forward length=460
E-Value5.8E-230
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.1076588862996
Replicate 22.2542415417461
Replicate 32.6862246034809
Condition 2: 8 Hour
Replicate 15.0068307701095
Replicate 25.7874999741902
Replicate 35.3289619012453
Condition 3: 24 Hour
Replicate 12.7068659977475
Replicate 23.2024951140491
Replicate 33.3994929415591


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_136823.p2 GENE.S_Transcript_136823~~S_Transcript_136823.p2 ORF type:complete len:460 (+),score=71.48,Glyco_hydro_28|PF00295.13|4.4e-92,Pectate_lyase_3|PF12708.3|1.7e-08,Pectate_lyase_3|PF12708.3|2e+03,Beta_helix|PF13229.2|1.5e-05 S_Transcript_136823:2191-3570(+)
ATGGAACTTGGAAGCTTGCTGATTACTGCTCATGGTATGGCTGAAAACAAGCTACACAAGACAGTTGCCCTGCTTGGAGAACTTGAAAGTTTCGACATTTACGAAGAAGATGAAATAGAAGATTATGAAATGCCATCATGGACTAGCGGACATGGTAAGAAAGTTCTTGTGAATGTTGATAGCTTTGGGGCCATTGGAGATGGAGTTTCTGATGATACTCAGGCCTTCTTAAAAGCATGGAACCAATCCTGCACTACGCCGAATTCAGTCTTCTTGGTTCCTGGAGAGCATCGTTATCTGGTTAATGCAACAAAGTTTCAGGGACCATGTGCTGATAGATTAATAGTTCAAATTGATGGGACGATAGTGGCACCGGAAGAGCCTAAGAACTGGGATCCAAACTTTTTGCGGGCATGGTTGAGCTTTTACAACTTAACTGGTGTACTTTTCCAAGGCAGTGGGGTTATCGATGGTTCAGGCAGCAAATGGTGGGCAGCATCCTGCAAAAAGAATAAAACCAATCCATGTAAAGGAGCACCTACTGCATTTACAATAGATTCGAGCTCTGCTATAAGGGTCAGAGGTTTGACGATCCAGAATAGCCAACAGATGCATTTTGTCATCTCTCGTTCTGATTCTGTGCGAGTGTCAAATATGCTAGTATCTGCCCCCGGGGACAGTCCTAACACAGATGGAATACATATAACTGAATCAACTAATGTTCTTCTTCTGAATTGTAAAATTGGAACAGGGGATGATTGCATTTCCATAGTCAATGCCAGCTCAAACATCAAAATGAAGACAATATATTGCGGTCCTGGGCATGGAATTAGCATAGGAAGCCTGGGTAAGAATAACTCCACTGGCATTGTCTCAAAAGTGGTTCTGACTGGAGCATTTATAAAGAATGCCACTAATGGCGTCAGAATTAAGACTTGGCAGGGAGGATCTGGTTATGTTAAAGCAGTACGGTTTGAAAATGTGATGATGCAAGACGTTGCAAACCCTATACTAATCGACCAGTTCTATTGTGATTCTCCAAATCCTTGTGCCAACCAGACAGAAGCTGTGCAAATAAGTCAGATAATGTACCGGAATATTACAGGAACTACAAAGAGCAAGGAAGCCATGAAGTTTGCTTGCAGCGACACGGTGCCTTGCAGGCACATTGTCCTGACCAATATTGACTTGCAAAAGAAGGATGGCACAGCTGAGACTTATTGCAACTCCGCCACTGGCTTTGGTTTCGGAACTATCAATCCCCCTGCAGATTGCCTTACTTCCGAGGACAGGGATTATACCATGCTTCCCTCAGAAAGGGATTCTTATTCCAGAGTCAGTCAATCAAGAGAAGATCACCTTGTTCATACAGAGCTGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_136823.p2 GENE.S_Transcript_136823~~S_Transcript_136823.p2 ORF type:complete len:460 (+),score=71.48,Glyco_hydro_28|PF00295.13|4.4e-92,Pectate_lyase_3|PF12708.3|1.7e-08,Pectate_lyase_3|PF12708.3|2e+03,Beta_helix|PF13229.2|1.5e-05 S_Transcript_136823:2191-3570(+)
MELGSLLITAHGMAENKLHKTVALLGELESFDIYEEDEIEDYEMPSWTSGHGKKVLVNVDSFGAIGDGVSDDTQAFLKAWNQSCTTPNSVFLVPGEHRYLVNATKFQGPCADRLIVQIDGTIVAPEEPKNWDPNFLRAWLSFYNLTGVLFQGSGVIDGSGSKWWAASCKKNKTNPCKGAPTAFTIDSSSAIRVRGLTIQNSQQMHFVISRSDSVRVSNMLVSAPGDSPNTDGIHITESTNVLLLNCKIGTGDDCISIVNASSNIKMKTIYCGPGHGISIGSLGKNNSTGIVSKVVLTGAFIKNATNGVRIKTWQGGSGYVKAVRFENVMMQDVANPILIDQFYCDSPNPCANQTEAVQISQIMYRNITGTTKSKEAMKFACSDTVPCRHIVLTNIDLQKKDGTAETYCNSATGFGFGTINPPADCLTSEDRDYTMLPSERDSYSRVSQSREDHLVHTEL*

Click here to download the sequence:
Link to NCBI Protein BLAST