Transcript Information: S_Transcript_137235.p1


Annotated TAIR IDAT5G52630.1
Annotated Gene Namemitochondrial RNAediting factor 1
Annotated Gene Symbol(s)MEF1
Annotation TypeOrtholog
Chromosome Positionchr5:21350375-21352141 | Forward length=588
E-Value2.3E-93
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.76662966521096
Replicate 20.81714035398203
Replicate 30.60716826612677
Condition 2: 8 Hour
Replicate 12.9837994682408
Replicate 23.590543608845
Replicate 33.7719401111695
Condition 3: 24 Hour
Replicate 10.8090697589109
Replicate 20.55960028583574
Replicate 30.83035537136185


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_137235.p1 GENE.S_Transcript_137235~~S_Transcript_137235.p1 ORF type:3prime_partial len:243 (+),score=40.75,PPR|PF01535.16|5.5e+02,PPR|PF01535.16|1.3e+03,PPR|PF01535.16|5.1e-05,PPR|PF01535.16|0.00035,PPR|PF01535.16|0.00071,PPR_2|PF13041.2|4e-07,PPR_2|PF13041.2|0.0025,PPR_2|PF13041.2|0.014,PPR_1|PF12854.3|1.7,PPR_1|PF12854.3|6.6e+02,PPR_1|PF12854.3|0.003,PPR_1|PF12854.3|0.0076,PPR_3|PF13812.2|1.2e+03,PPR_3|PF13812.2|0.92,PPR_3|PF13812.2|0.061,PPR_3|PF13812.2|6.4 S_Transcript_137235:105-830(+)
ATGCTCCAACCCATACCAGAGCCCAAACAACCGCCAAAAACCCTCCTCAAACCCTGTTCTTCACCATCATTCCCACCCAAAACCCCAACAAATCCATTCAATCAATTAAGCCACGAGCAACACTACCGCCATGTCTGCAACCTTCTCAACTCATTCACCCGCTCTCGGGCCCTCCCAAAAGGCCTTCAACTCCATGCCCTCATCATCAAATCAGGCTTCCAAACAGTCCCTCTTGTTGCCCATCACTTGATCAACTTTTACTCCAAATCCCAACTTCCTTACCTTTCTCGTCAAATCTTTGACGAAACCCCCCTCAAACTATCCACAACTTGGAGCTCAGTGATCTCAGCTTTTGCCCAGAATGAGCTCCCTTCCCTTGCTCTTGAATTCTTTCGCTCTATGTTGGGTACCGGGTTTCGACCTGATGATCATACTTATCCTAGCGTCACCAAGTCTTGTGCCATTCTTTCAAGGGTTGATGTGGGCAGGTCGATTCATGGAGTTGTTTCGAGAACTGGGTATGTGGCAGATGTCTTTGTTGGGAGCTCATTGGTTGATATGTATGCTAAATGTGGGGCGATAACGGATGCACGTAAGGTGTTCGATGAAATGCCGGAGAGAAATGTGGTGTCTTGGAGTGGAATGATTTTTGGGTATGCTCAGTTGGGTGAAAATGAGGAGGCTCTGAGGTTATTTACTCGAGCTTTGGTCGAGGAAGTTGATGTT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_137235.p1 GENE.S_Transcript_137235~~S_Transcript_137235.p1 ORF type:3prime_partial len:243 (+),score=40.75,PPR|PF01535.16|5.5e+02,PPR|PF01535.16|1.3e+03,PPR|PF01535.16|5.1e-05,PPR|PF01535.16|0.00035,PPR|PF01535.16|0.00071,PPR_2|PF13041.2|4e-07,PPR_2|PF13041.2|0.0025,PPR_2|PF13041.2|0.014,PPR_1|PF12854.3|1.7,PPR_1|PF12854.3|6.6e+02,PPR_1|PF12854.3|0.003,PPR_1|PF12854.3|0.0076,PPR_3|PF13812.2|1.2e+03,PPR_3|PF13812.2|0.92,PPR_3|PF13812.2|0.061,PPR_3|PF13812.2|6.4 S_Transcript_137235:105-830(+)
MLQPIPEPKQPPKTLLKPCSSPSFPPKTPTNPFNQLSHEQHYRHVCNLLNSFTRSRALPKGLQLHALIIKSGFQTVPLVAHHLINFYSKSQLPYLSRQIFDETPLKLSTTWSSVISAFAQNELPSLALEFFRSMLGTGFRPDDHTYPSVTKSCAILSRVDVGRSIHGVVSRTGYVADVFVGSSLVDMYAKCGAITDARKVFDEMPERNVVSWSGMIFGYAQLGENEEALRLFTRALVEEVDV

Click here to download the sequence:
Link to NCBI Protein BLAST