Transcript Information: S_Transcript_137321.p2


Annotated TAIR IDAT5G47680.1
Annotated Gene NameFUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: tRNA (guanine-N1-)-methyltransferase (InterPro:IPR016009), tRNA (guanine-N(1)-)-methyltransferase, metazoa (InterPro:IPR016653), tRNA (guanine-N1-)-methyltransferase, eukaryotic (InterPro:IPR007356); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Annotated Gene Symbol(s)TRM10, AtTRM
Annotation TypeOrtholog
Chromosome Positionchr5:19316329-19317467 | Reverse length=344
E-Value2.3E-50
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.20009775364797
Replicate 20.33177127154158
Replicate 30.277334377197
Condition 2: 8 Hour
Replicate 10.16034128057995
Replicate 20
Replicate 30.32053906172904
Condition 3: 24 Hour
Replicate 10.16424724429018
Replicate 20
Replicate 30.37927886323483


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_137321.p2 GENE.S_Transcript_137321~~S_Transcript_137321.p2 ORF type:5prime_partial len:133 (-),score=45.73 S_Transcript_137321:644-1042(-)
AAAGAAACGCAACCCCCACCCTCAAAGAACGCACAGAAGAAGCTCTTAAAGCAACAAAGATACGAAGCCAAGAAAGCAGAGAAGAAAGCCTTAGCCAAAGAGCAAAAGCAGAAAGATAAAGAACGCAAACGCCAGGAATGGGAAGAGAACCTCTCAAGCCTTGGATCAGAAGAGGAGAAGATCAAGTTGATAGAATCAAGAAGAGAGCTCAGAAAGGAGAGGATGGATAAAAGGTCCGAGGAAAGAGACAAGAAGATTGAGAGGCTTATGAAGGCTAAGATTGAGGGCCAGAATATTGTTATTGATCTTGAGTTTTCTCATCTTATGACCCCTCCTGAGCTCAATAGCCTTGTTCAGCAGTTAACGGAAGGTGCACTTCCCCAGGCCATCTCTGGTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_137321.p2 GENE.S_Transcript_137321~~S_Transcript_137321.p2 ORF type:5prime_partial len:133 (-),score=45.73 S_Transcript_137321:644-1042(-)
KETQPPPSKNAQKKLLKQQRYEAKKAEKKALAKEQKQKDKERKRQEWEENLSSLGSEEEKIKLIESRRELRKERMDKRSEERDKKIERLMKAKIEGQNIVIDLEFSHLMTPPELNSLVQQLTEGALPQAISG*

Click here to download the sequence:
Link to NCBI Protein BLAST