Transcript Information: S_Transcript_137322.p1


Annotated TAIR IDAT5G47680.1
Annotated Gene NameFUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: tRNA (guanine-N1-)-methyltransferase (InterPro:IPR016009), tRNA (guanine-N(1)-)-methyltransferase, metazoa (InterPro:IPR016653), tRNA (guanine-N1-)-methyltransferase, eukaryotic (InterPro:IPR007356); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Annotated Gene Symbol(s)TRM10, AtTRM
Annotation TypeHomolog
Chromosome Positionchr5:19316329-19317467 | Reverse length=344
E-Value5E-17
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 21.1861714815868
Replicate 30.29746348521936
Condition 2: 8 Hour
Replicate 11.6051369055907
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30.27120477854963


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_137322.p1 GENE.S_Transcript_137322~~S_Transcript_137322.p1 ORF type:3prime_partial len:186 (+),score=52.49 S_Transcript_137322:47-556(+)
ATGGAAGAAACAGGCCAGAATCCACCACCACAACCATCCCCCAAAGCCACCGAACAAAACACCACCACCACCTTCCTCACAAACCCTCCAAAAGAAACGCAACCCCCACCCTCAAAGAACGCACAGAAGAAGCTCTTAAAGCAACAAAGATACGAAGCCAAGAAAGCAGAGAAGAAAGCCTTAGCCAAAGAGCAAAAGCAGAAAGACAAAGAACGCAAACGCCAGGAATGGGAAGAGAACCTCTCAAGCCTTGGATCAGAAGAGGAGAAGATCAAGTTGATAGAATCAAGAAGAGAGCTCAGAAAGGAGAGGATGGATAAAAGGTCCGAGGAAAGAGACAAGAAGATTGAGAAGCTCATGAATGCTAAGATTGAGGGTCAGAATATTGTTATTGATCTTGAGTTTTCTCATCTTATGACCCCTCCTGAGCTCAATAGCCTTGTTCAGCAGGTTTGTTTGCTTTTTTATGAATGGCTAAATTATGCAGTAAGTTTAGTGTTTTTCATTTAC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_137322.p1 GENE.S_Transcript_137322~~S_Transcript_137322.p1 ORF type:3prime_partial len:186 (+),score=52.49 S_Transcript_137322:47-556(+)
MEETGQNPPPQPSPKATEQNTTTTFLTNPPKETQPPPSKNAQKKLLKQQRYEAKKAEKKALAKEQKQKDKERKRQEWEENLSSLGSEEEKIKLIESRRELRKERMDKRSEERDKKIEKLMNAKIEGQNIVIDLEFSHLMTPPELNSLVQQVCLLFYEWLNYAVSLVFFIY

Click here to download the sequence:
Link to NCBI Protein BLAST