Transcript Information: S_Transcript_137323.p1


Annotated TAIR IDAT5G47680.1
Annotated Gene NameFUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: tRNA (guanine-N1-)-methyltransferase (InterPro:IPR016009), tRNA (guanine-N(1)-)-methyltransferase, metazoa (InterPro:IPR016653), tRNA (guanine-N1-)-methyltransferase, eukaryotic (InterPro:IPR007356); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Annotated Gene Symbol(s)TRM10, AtTRM
Annotation TypeOrtholog
Chromosome Positionchr5:19316329-19317467 | Reverse length=344
E-Value1.1E-139
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.1538811451737
Replicate 22.8599912389371
Replicate 33.512902111162
Condition 2: 8 Hour
Replicate 12.6515696955165
Replicate 22.7225000990144
Replicate 33.3834678738066
Condition 3: 24 Hour
Replicate 12.6583720649929
Replicate 21.9186295514368
Replicate 31.9350245707629


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_137323.p1 GENE.S_Transcript_137323~~S_Transcript_137323.p1 ORF type:complete len:378 (+),score=110.04,tRNA_m1G_MT|PF01746.17|4.3e-27,tRNA_m1G_MT|PF01746.17|3.1e+03 S_Transcript_137323:47-1135(+)
ATGGAAGAAACAGGCCAGAATCCACCACCACAACCATCCCCCAAAGCCACCGAACAAAACACCACCACCACCTTCCTCACAAACCCTCCAAAAGAAACGCAACCCCCACCCTCAAAGAACGCACAGAAGAAGCTCTTAAAGCAACAAAGATACGAAGCCAAGAAAGCAGAGAAGAAAGCCTTAGCCAAAGAGCAAAAGCAGAAAGACAAAGAACGCAAACGCCAGGAATGGGAAGAGAACCTCTCAAGCCTTGGATCAGAAGAGGAGAAGATCAAGTTGATAGAATCAAGAAGAGAGCTCAGAAAGGAGAGGATGGATAAAAGGTCCGAGGAAAGAGACAAGAAGATTGAGAAGCTCATGAATGCTAAGATTGAGGGTCAGAATATTGTTATTGATCTTGAGTTTTCTCATCTTATGACCCCTCCTGAGCTCAATAGCCTTGTTCAGCAGATAATGTATTGCTATGCAGTTAACGGAAGGTGCACTTCCCCAGGCCATCTCTGGTTGACTGGTTGTGAAGGTAATATGGAAGACCACTTGAAGAGAATTCCTGGAATTGATAAATGGATCATTGAGAAAGAGAGTCGATCATACATTGAAGCATTGCAAGACCGGAAGGAGAATTTGGTTTATCTGACCGCTGATGCAGAAACTGTTCTTGATGATCTTGATGCCAAGAAATTATATATCATTGGTGGCTTGGTGGATCGGAATCGATGGAAAGGAATAACTTTGAACAAAGCTCAAGACCAGGGTATCCAAGCAGCCAGACTCCCTATTGGCAATTACATGAAGATGTCAAGTTCTCAGGTTCTTACAGTAAACCAAGTGGTAGAGATACTGCTCAAGTACTTGGAGTTGAGGGATTGGAAGACTGCTTTCTTCCAAGTCATTCCTCAGAGGAAAAGAGGTGAAACAGGTTCAGAAGAAAATGGGACAGAATTAGAAGGCGAGGAAAACAAGGAAATGGATCATCTGTCTGGAGGCCAAAAGAAAATGAAAATGTCTGAAACAGAATCAGAGACAAGTGAAAGAGAAGTAGAAAATATCGAAACTGAGAACCCATCCAAACAGAGAGATGTAAATTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_137323.p1 GENE.S_Transcript_137323~~S_Transcript_137323.p1 ORF type:complete len:378 (+),score=110.04,tRNA_m1G_MT|PF01746.17|4.3e-27,tRNA_m1G_MT|PF01746.17|3.1e+03 S_Transcript_137323:47-1135(+)
MEETGQNPPPQPSPKATEQNTTTTFLTNPPKETQPPPSKNAQKKLLKQQRYEAKKAEKKALAKEQKQKDKERKRQEWEENLSSLGSEEEKIKLIESRRELRKERMDKRSEERDKKIEKLMNAKIEGQNIVIDLEFSHLMTPPELNSLVQQIMYCYAVNGRCTSPGHLWLTGCEGNMEDHLKRIPGIDKWIIEKESRSYIEALQDRKENLVYLTADAETVLDDLDAKKLYIIGGLVDRNRWKGITLNKAQDQGIQAARLPIGNYMKMSSSQVLTVNQVVEILLKYLELRDWKTAFFQVIPQRKRGETGSEENGTELEGEENKEMDHLSGGQKKMKMSETESETSEREVENIETENPSKQRDVN*

Click here to download the sequence:
Link to NCBI Protein BLAST