Transcript Information: S_Transcript_137332.p1


Annotated TAIR IDAT1G80880.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:30395194-30396921 | Reverse length=540
E-Value8.2E-152
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.4637150679349
Replicate 21.6914805327428
Replicate 31.6905841409967
Condition 2: 8 Hour
Replicate 13.4831470851317
Replicate 22.4609033503699
Replicate 34.4763279970461
Condition 3: 24 Hour
Replicate 11.5655499834926
Replicate 21.4731477524626
Replicate 31.9757268117341


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_137332.p1 GENE.S_Transcript_137332~~S_Transcript_137332.p1 ORF type:5prime_partial len:600 (+),score=109.43,PPR_2|PF13041.2|1.6e+03,PPR_2|PF13041.2|0.036,PPR_2|PF13041.2|0.91,PPR_2|PF13041.2|0.00017,PPR_2|PF13041.2|3.3e-06,PPR_2|PF13041.2|1.3e-06,PPR_2|PF13041.2|7.9e-08,PPR_2|PF13041.2|0.14,PPR_2|PF13041.2|8.3e-05,PPR_2|PF13041.2|25,PPR|PF01535.16|5.1e+02,PPR|PF01535.16|0.033,PPR|PF01535.16|4.5e+03,PPR|PF01535.16|4.7e-06,PPR|PF01535.16|0.0081,PPR|PF01535.16|0.0078,PPR|PF01535.16|1.2e+03,PPR|PF01535.16|2.8,PPR|PF01535.16|0.00072,PPR_1|PF12854.3|0.013,PPR_1|PF12854.3|88,PPR_1|PF12854.3|0.0022,PPR_1|PF12854.3|2.9,PPR_1|PF12854.3|3.8e-05,PPR_1|PF12854.3|7.4e+03,PPR_1|PF12854.3|5,PPR_3|PF13812.2|1.1e+04,PPR_3|PF13812.2|73,PPR_3|PF13812.2|14,PPR_3|PF13812.2|1.6e+03,PPR_3|PF13812.2|0.003,PPR_3|PF13812.2|1.4e+04,PPR_3|PF13812.2|0.0083,PPR_3|PF13812.2|1.5e+03,PPR_3|PF13812.2|2.4,PPR_3|PF13812.2|27 S_Transcript_137332:1-1800(+)
CGCCTTGCAGCATCCTATGGGAAAAAGAAGAAGACGCTGAAGTTGGGCTTAGACTTTAGACGAGATGTTTACTCGGCACTCCACAGCAACAACATACACCAATTGGAGATGGCACTCCGTCTCATCGCAAGGATACTCCATCACCTCCGCTATCCTTCCTTGTTCTCACCTGCTTCTCGACCCACTTTTCACCCTCACATTAGCACCTCTTCCGTTACTCGCCACGCCAACTTCTTATTCTCTCAGGCATTTCGTCGAACACTTGCAACGCATTCGCATACCCACTCCCAAAACCTTAACTTTTCGACCCTTCAATCTTCTTCTGTACAATCCCTTTACAACCCTATCGACTTCAGTGACTTTGAAAGCAAAAGCAACGCCAAAGACCAAGTGGGTGTTCTTGAGGTGGTTGAATTAGTGAAAAAGGCCAAAGATTGTGGCTCTATAAAGGAGTCCATTGATTTTCTTGGTAGCTCTGGAGTGCAACCTGATGCCAAACAGCTTTGTTTGGCTATATGGGCATTAAGAAATGAATGGGAATTGGCGTTGTTGGGTTTTCATTGGAGTGAAAAATGGGGTCTTGTTGATGACAAATGCTTGAGTTTGATTGTTTGGGTGTTGGGTACTCATCATAAATTTGACATTGCTTGGTCTTTGATTCGTGATTTACACAAGTTGGTGGATACTAGGCAAGCAATGCTGGCCATCATAGAGAGATATGCAGCATCAAATTCTCATGAGAAGGCAATAAAAACTTTTCATTTTATCGAGAAGCTTACAATAAATCCAGACCAGAATGCATTTTACTCTGTAATGAGTGCTTTGTGCAGATTTGGGAATGTTGAAGAAGCTGAAGAATTCATGCTGAAAAATAAGAAGCTGTACCCTTTAGAAACTGAGGGCTTCAACATCATTCTTCATGGCTGGTGTGACATTTCTGTTGATATATTTGAAGCCAAGAGAGTCTGGAGGGACATGGCAGGTTACTGTATCACACCTGATGCAAGGTCTTACACACATATGATCTCCTGTTTCTCGAGGGTTGGAAACCTTTTTGATTCTCTAAGGCTGTATGATGAGATGAGGAAACGGGGATGGGTCCCTGGTCTTGAGGTATACAATTCATTGATATATGTGATGACTTGTGAAAATTGCTTGAGTGAAGCTGTCAAAATGCTAGACAAAATCAAAGAGATGGGGTTGCAGCCAGCTTCTCAGACCTTTAATAGCTTGATATGTCCTTTATGTGAATCTGGGAAGTTTGAGGAGGCAAGGAGACTGTTAGCACTGATGACACAGGAGGGTAATAGGCCAACTGTTGAGACATATCACGCGTTCTTGAAAGGTGCAGATTTAGAAAGCACCTTGGAATTTCTGAACCTGATGAAGAAAGATAAAGTTGGCCCTGATAGTTGTACATTTCTTTTAATTTTTGATAGGTTCTTCGAATTAAGACAACCTGAAAATGCATTAAAAGTTTGGGTGGAAATGAGAGATCTTGGAGTGTATCCAGAATCAGCACATTACTTGTCACTTATACGTGGCTTAGCAAATTGTGGCTGCCTGATCAAGGCCAGAGAACTGCACACTGAGATGATTTCATATGGACTTGTGGATGATCCAAAACTCAAGAAACTGCTCCAAGCCCCGCAAGAAAGTAGTTGCCGTGGAAGGATTGAGCATGTGAAAACTGTGAGATTTGTTAATAAATTGGAATCCCCATTTACTTCACATATTAAGCCATGTAGAGGGAGGAGAAACCGAGGTGGTAAAAGGGAAAGGGAAGAAGCAAAAGGTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_137332.p1 GENE.S_Transcript_137332~~S_Transcript_137332.p1 ORF type:5prime_partial len:600 (+),score=109.43,PPR_2|PF13041.2|1.6e+03,PPR_2|PF13041.2|0.036,PPR_2|PF13041.2|0.91,PPR_2|PF13041.2|0.00017,PPR_2|PF13041.2|3.3e-06,PPR_2|PF13041.2|1.3e-06,PPR_2|PF13041.2|7.9e-08,PPR_2|PF13041.2|0.14,PPR_2|PF13041.2|8.3e-05,PPR_2|PF13041.2|25,PPR|PF01535.16|5.1e+02,PPR|PF01535.16|0.033,PPR|PF01535.16|4.5e+03,PPR|PF01535.16|4.7e-06,PPR|PF01535.16|0.0081,PPR|PF01535.16|0.0078,PPR|PF01535.16|1.2e+03,PPR|PF01535.16|2.8,PPR|PF01535.16|0.00072,PPR_1|PF12854.3|0.013,PPR_1|PF12854.3|88,PPR_1|PF12854.3|0.0022,PPR_1|PF12854.3|2.9,PPR_1|PF12854.3|3.8e-05,PPR_1|PF12854.3|7.4e+03,PPR_1|PF12854.3|5,PPR_3|PF13812.2|1.1e+04,PPR_3|PF13812.2|73,PPR_3|PF13812.2|14,PPR_3|PF13812.2|1.6e+03,PPR_3|PF13812.2|0.003,PPR_3|PF13812.2|1.4e+04,PPR_3|PF13812.2|0.0083,PPR_3|PF13812.2|1.5e+03,PPR_3|PF13812.2|2.4,PPR_3|PF13812.2|27 S_Transcript_137332:1-1800(+)
RLAASYGKKKKTLKLGLDFRRDVYSALHSNNIHQLEMALRLIARILHHLRYPSLFSPASRPTFHPHISTSSVTRHANFLFSQAFRRTLATHSHTHSQNLNFSTLQSSSVQSLYNPIDFSDFESKSNAKDQVGVLEVVELVKKAKDCGSIKESIDFLGSSGVQPDAKQLCLAIWALRNEWELALLGFHWSEKWGLVDDKCLSLIVWVLGTHHKFDIAWSLIRDLHKLVDTRQAMLAIIERYAASNSHEKAIKTFHFIEKLTINPDQNAFYSVMSALCRFGNVEEAEEFMLKNKKLYPLETEGFNIILHGWCDISVDIFEAKRVWRDMAGYCITPDARSYTHMISCFSRVGNLFDSLRLYDEMRKRGWVPGLEVYNSLIYVMTCENCLSEAVKMLDKIKEMGLQPASQTFNSLICPLCESGKFEEARRLLALMTQEGNRPTVETYHAFLKGADLESTLEFLNLMKKDKVGPDSCTFLLIFDRFFELRQPENALKVWVEMRDLGVYPESAHYLSLIRGLANCGCLIKARELHTEMISYGLVDDPKLKKLLQAPQESSCRGRIEHVKTVRFVNKLESPFTSHIKPCRGRRNRGGKREREEAKG*

Click here to download the sequence:
Link to NCBI Protein BLAST