Transcript Information: S_Transcript_137346.p1


Annotated TAIR IDAT5G56040.2
Annotated Gene NameLeucine-rich receptor-like protein kinase family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:22695050-22698410 | Forward length=1090
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.8473680821222
Replicate 23.6639989800873
Replicate 32.4700092969108
Condition 2: 8 Hour
Replicate 14.0746727927379
Replicate 22.9762548636779
Replicate 35.4621859487765
Condition 3: 24 Hour
Replicate 11.2872877771243
Replicate 21.7200214142764
Replicate 33.8959050732902


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_137346.p1 GENE.S_Transcript_137346~~S_Transcript_137346.p1 ORF type:complete len:1120 (+),score=175.96,LRR_8|PF13855.2|1.4e-06,LRR_8|PF13855.2|21,LRR_8|PF13855.2|0.67,LRR_8|PF13855.2|0.0098,LRR_8|PF13855.2|2.3e-08,LRR_8|PF13855.2|3.2e-07,LRR_8|PF13855.2|0.3,LRR_8|PF13855.2|3.4e-05,LRR_8|PF13855.2|2.2e-07,LRR_8|PF13855.2|2.1e-07,LRR_8|PF13855.2|7.3e-06,LRR_8|PF13855.2|0.00032,Pkinase|PF00069.21|2.9e-42,Pkinase_Tyr|PF07714.13|1.4e-40,LRR_4|PF12799.3|2.2e+02,LRR_4|PF12799.3|3,LRR_4|PF12799.3|0.0044,LRR_4|PF12799.3|0.0016,LRR_4|PF12799.3|6.8,LRR_4|PF12799.3|12,LRR_4|PF12799.3|0.011,LRR_4|PF12799.3|0.0095,LRR_4|PF12799.3|0.087,LRR_4|PF12799.3|0.23,LRR_4|PF12799.3|14,LRR_4|PF12799.3|2.6,LRR_4|PF12799.3|69,LRR_4|PF12799.3|3.6e+02,LRR_4|PF12799.3|0.0037,LRR_4|PF12799.3|0.0025,LRR_4|PF12799.3|0.0083,LRR_4|PF12799.3|7.8e-05,LRRNT_2|PF08263.8|8.2e-12,LRR_1|PF00560.29|1.4e+02,LRR_1|PF00560.29|1.3e+02,LRR_1|PF00560.29|53,LRR_1|PF00560.29|12,LRR_1|PF00560.29|3e+03,LRR_1|PF00560.29|0.65,LRR_1|PF00560.29|42,LRR_1|PF00560.29|1.3e+03,LRR_1|PF00560.29|2e+02,LRR_1|PF00560.29|7.4e+02,LRR_1|PF00560.29|54,LRR_1|PF00560.29|19,LRR_1|PF00560.29|5.2e+02,LRR_1|PF00560.29|1.8e+02,LRR_1|PF00560.29|4.4e+02,LRR_1|PF00560.29|1.3,LRR_1|PF00560.29|1.1e+02,LRR_1|PF00560.29|23 S_Transcript_137346:536-3895(+)
ATGCCTGTTAATCACCTATGGCACCACCACCTCTTTGTTTTTCTTTCCCTTCTTCTCATCCTTTGTCTTTCATTGTCTTCTTCCCTTGCCATCAACCCGCAAGGCGAGGCTCTCCTTTCGTGGAAGCGAAGCCTAAATGGATCGGTCGAGGCCTTGAAGAGTTGGAACCCGAGTGATCAAACCCCTTGTAGGTGGTTTGGGATCACTTGCAACTCCAACAATGAGGTCATTGAATTGAACTTGAGGTACGTAGATTTGTATGGAAATGTTCCTTCCAACTTGGGCTCTTTATCACTGACCTTAACAAAGCTTGCCCTCGTGGGAACGAACCTTACTGGTTCGATCCCAAAAGAGATAGGTTTACTCAATGAGCTCGAGTCCTTAGACTTGAGTGAGAATGCATTGAATGGTGAAATCCCAAGTGAGATATGCTACTTGCCTAAGTTAGAGGATCTTTATCTAAACTCGAATCAACTAGAAGGTTCTATACCTATGGATATTGGGAATTTGACAAGCTTAGTTTGGTTGATCCTCTATGACAACCAACTTAGCGGGCGAATCCCGAGCACCATAGGGAGCCTCAAGAAGCTAGCAGTTATAAGAGCAGGTGGTAACAAGAATCTTGAAGGGTCATTGCCTTTAGAGCTTGGCAACTGTACTGATTTGGTCATACTTGGATTAGCAGAAACCAGCATCTCTGGTGCTCTGCCTTCCACCATAGGCAATCTCAAGAAACTCGAGACGCTTGCCATCTACACTGCCCTCCTCTCCGGCAAGATCCCACCGGAGATAGGAGATTGCACCAACTTACAAAGCATCTACCTCTACGAGAACTCGCTCTCGGGGTCAATCCCAAGCAGTTTGGGGAACCTCAAGAATCTCCAAACCTTGCTCCTCTGGCAGAACACTCTTGTGGGCACCATCCCTCCGGAGCTAGGGAGGTTGTCGAAGCTTCGAGTCATTGATATGTCGATGAATTCCTTGACGGGTAGCATACCCGATTCATTCGGAAACTTGACAAGCTTACAAGAGCTTCAATTAAGTGTAAATCAGTTGTCAGGTCCAATCCCATCTTCTTTGGGATCATGCAGTAGCCTTAGCCTCATTGAGCTAGACAACAACCAGTTAAGTGGCGCAATCCCGCCGGAACTCGGTCAGTTGGGTAACCTTTCTCTCCTCTATTTATGGCAAAACAAACTTGAGGGTAACATCCCATCAACCTTGGCTAATTGCCAGAACTTAGAAGCCATTGATTTCTCATTAAACAGCTTAACTGGGGTTATCCCAAAAGGGATATTCCAGCTTCAAAATCTCAACAAATTGCTATTGTTATCCAACAATTTGTCAGGCACTATCCCTTCAGCAGTTGGGAATTGCACTTCATTGGTCAGATTCAGAGCAAATGACAACAAACTCACTGGGTCAATCCCTTCAACTGTTGGTGACCTTAAAAATCTCAACTTCTTTGATCTTGGATCCAACAGGCTTACTGGTGTAATTCCAGAAGAAATCTCAGGCTGTCAGAATCTCACTTTCCTTGACCTTCACTCCAACTCAATCTCTGGTACTTTACCTGTAAGTTTAAGCTCTCTGTTATCTCTCCAGTTTATTGATGTGTCTGATAATATGATTGAAGGGGAGCTAAGCTCAAATGTTGGGTCATTGAGTTCACTCACTAAACTCGTCCTGGGAAAGAATAAACTCACTGGGTCAATCCCGAGTCATATTGGTTCATGCTCAAAGCTCCAAATGATTGATCTTAGTAGCAACCAATTTTACGGCGAGATTCCGGGTACTATTGGAAAGATTCCGGCCTTAGAGATCACTTTAAATCTGAGCTGGAACCAACTTTCCGGCGAGATCCCACCGGAGTTTTCATCATTGAGCAAGCTTGGTGTGCTTGATCTTTCCCATAATAAGTTATCTGGTGATCTACATTCTCTCGCAAGCCTCCAGAATCTAGTGGTGTTGAATATCTCCAACAATGACTTTTCCGGCCAGTTACCGGACACGCCGTTCTTCTCCAAACTCCCCGCCGGAGTTCTTGCCGGAAACCCTGGTCTCTGCGCTGTCGGTGACCGGAAATGTTCCGCCGGCGGGAAGAGTGCTCGGCGGACGAGGGGGGCAAGGGTGGCAATGGTGGTGCTCCTTTCAGTGGCATGTGCTCTCCTTTTAGCAGCCCTCTACATTATTGTCAGTGGGGCCAAGAAGTTCCGTGGGGCCCATGATAGAGATGACGTGGAATGTCCCGAGGATGATGTGGAGATGGGGCCCCCATGGGAGGTTACATTGTATCAAAAGTTGGACCTCTCAATTGCTGATGTGGCAAGGGGTATGACACCGGGGAATATCATCGGCCGGGGGAGGTCCGGGGCCGTGTATAGGGTTACCCTTCCGTCGGGTCTCGTGGTTGCAGTTAAGAAGCTCAAGGCGGCGGATATGATGTCGGTGGCTTTTTTCGCCTCCGAGATAGCCACATTGGGCCGGATTCGACACCGGAACATTGTTAAGCTTTTAGGGTGGGGAGCTAACCGGAAGACCAAACTCTTGTTTTATGAGTATATGTCAAATGGTACTCTTGGTGAATTGCTATATGAGGGTGACACCACTAATGTTGTTGTACAATGGGATACTCGGTTTAAGATAGCTTTAGGAGTTGCTGAGGGGATTGCTTATTTGCATCATGATTGTGTACCAGCTATAGTTCATCGAGATATAAAGGTTCATAACATATTGTTGGGTGATAGATATGAGGCTAGCTTAGCTGACTTTGGTCTTGCTAGCTATGTTGAAGATCAAAGTGACCAGATGAATACAGCTCCACAATTTGCTGGATCATATGGGTATATGGCTCCTGAGCATGCGTGCATGGCGAGGATCACAGAAAAGAGCGATGTGTTCAGTTATGGAGTTGTTTTGTTGGAGATAATTACAGGGAAAAAGCCTGTTGATCCGTCGTTTCCAGATGAGCAACATGTTATTCAATGGGTCCGAGAATACTTAAGGGATAAAAAGGACCCTGTTGAGATTATTGATTCTAAGTTGCAAGGCCATCCAGACACGCAAATTCAAGAGATGCTCCAAGCATTAGGAATCGCTCTCCTGTGCACCAGCAACCGAGCAGAGGATCGCCCGACAATGAAGGATGTTGCCGTATTATTGAAAGAAATTAGGCATGAGCCTCCAAATGGAAGTGAGACTACCAAGCCCACTAGCAACGTCCCGAAAAAACAAGAAAACACATCATTATCGTCGTCTGCATCAATGACCCCATCTCAACTGTTACTTCTACAAGGGTCATCAAATTGCTCACTCGCCTATTTGTCTTCATCAGCAACTTACCTTCCACAAAATCAATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_137346.p1 GENE.S_Transcript_137346~~S_Transcript_137346.p1 ORF type:complete len:1120 (+),score=175.96,LRR_8|PF13855.2|1.4e-06,LRR_8|PF13855.2|21,LRR_8|PF13855.2|0.67,LRR_8|PF13855.2|0.0098,LRR_8|PF13855.2|2.3e-08,LRR_8|PF13855.2|3.2e-07,LRR_8|PF13855.2|0.3,LRR_8|PF13855.2|3.4e-05,LRR_8|PF13855.2|2.2e-07,LRR_8|PF13855.2|2.1e-07,LRR_8|PF13855.2|7.3e-06,LRR_8|PF13855.2|0.00032,Pkinase|PF00069.21|2.9e-42,Pkinase_Tyr|PF07714.13|1.4e-40,LRR_4|PF12799.3|2.2e+02,LRR_4|PF12799.3|3,LRR_4|PF12799.3|0.0044,LRR_4|PF12799.3|0.0016,LRR_4|PF12799.3|6.8,LRR_4|PF12799.3|12,LRR_4|PF12799.3|0.011,LRR_4|PF12799.3|0.0095,LRR_4|PF12799.3|0.087,LRR_4|PF12799.3|0.23,LRR_4|PF12799.3|14,LRR_4|PF12799.3|2.6,LRR_4|PF12799.3|69,LRR_4|PF12799.3|3.6e+02,LRR_4|PF12799.3|0.0037,LRR_4|PF12799.3|0.0025,LRR_4|PF12799.3|0.0083,LRR_4|PF12799.3|7.8e-05,LRRNT_2|PF08263.8|8.2e-12,LRR_1|PF00560.29|1.4e+02,LRR_1|PF00560.29|1.3e+02,LRR_1|PF00560.29|53,LRR_1|PF00560.29|12,LRR_1|PF00560.29|3e+03,LRR_1|PF00560.29|0.65,LRR_1|PF00560.29|42,LRR_1|PF00560.29|1.3e+03,LRR_1|PF00560.29|2e+02,LRR_1|PF00560.29|7.4e+02,LRR_1|PF00560.29|54,LRR_1|PF00560.29|19,LRR_1|PF00560.29|5.2e+02,LRR_1|PF00560.29|1.8e+02,LRR_1|PF00560.29|4.4e+02,LRR_1|PF00560.29|1.3,LRR_1|PF00560.29|1.1e+02,LRR_1|PF00560.29|23 S_Transcript_137346:536-3895(+)
MPVNHLWHHHLFVFLSLLLILCLSLSSSLAINPQGEALLSWKRSLNGSVEALKSWNPSDQTPCRWFGITCNSNNEVIELNLRYVDLYGNVPSNLGSLSLTLTKLALVGTNLTGSIPKEIGLLNELESLDLSENALNGEIPSEICYLPKLEDLYLNSNQLEGSIPMDIGNLTSLVWLILYDNQLSGRIPSTIGSLKKLAVIRAGGNKNLEGSLPLELGNCTDLVILGLAETSISGALPSTIGNLKKLETLAIYTALLSGKIPPEIGDCTNLQSIYLYENSLSGSIPSSLGNLKNLQTLLLWQNTLVGTIPPELGRLSKLRVIDMSMNSLTGSIPDSFGNLTSLQELQLSVNQLSGPIPSSLGSCSSLSLIELDNNQLSGAIPPELGQLGNLSLLYLWQNKLEGNIPSTLANCQNLEAIDFSLNSLTGVIPKGIFQLQNLNKLLLLSNNLSGTIPSAVGNCTSLVRFRANDNKLTGSIPSTVGDLKNLNFFDLGSNRLTGVIPEEISGCQNLTFLDLHSNSISGTLPVSLSSLLSLQFIDVSDNMIEGELSSNVGSLSSLTKLVLGKNKLTGSIPSHIGSCSKLQMIDLSSNQFYGEIPGTIGKIPALEITLNLSWNQLSGEIPPEFSSLSKLGVLDLSHNKLSGDLHSLASLQNLVVLNISNNDFSGQLPDTPFFSKLPAGVLAGNPGLCAVGDRKCSAGGKSARRTRGARVAMVVLLSVACALLLAALYIIVSGAKKFRGAHDRDDVECPEDDVEMGPPWEVTLYQKLDLSIADVARGMTPGNIIGRGRSGAVYRVTLPSGLVVAVKKLKAADMMSVAFFASEIATLGRIRHRNIVKLLGWGANRKTKLLFYEYMSNGTLGELLYEGDTTNVVVQWDTRFKIALGVAEGIAYLHHDCVPAIVHRDIKVHNILLGDRYEASLADFGLASYVEDQSDQMNTAPQFAGSYGYMAPEHACMARITEKSDVFSYGVVLLEIITGKKPVDPSFPDEQHVIQWVREYLRDKKDPVEIIDSKLQGHPDTQIQEMLQALGIALLCTSNRAEDRPTMKDVAVLLKEIRHEPPNGSETTKPTSNVPKKQENTSLSSSASMTPSQLLLLQGSSNCSLAYLSSSATYLPQNQ*

Click here to download the sequence:
Link to NCBI Protein BLAST