Transcript Information: S_Transcript_137674.p1


Annotated TAIR IDAT5G48850.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)ATSDI1
Annotation TypeHomolog
Chromosome Positionchr5:19805576-19807699 | Reverse length=306
E-Value1E-30
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.23141740204505
Replicate 20.38370068795678
Replicate 30.4811148543548
Condition 2: 8 Hour
Replicate 10.18543817667072
Replicate 20.19453781425849
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20.19707662240302
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_137674.p1 GENE.S_Transcript_137674~~S_Transcript_137674.p1 ORF type:3prime_partial len:115 (-),score=22.37,TPR_1|PF00515.24|0.0023,TPR_1|PF00515.24|0.1,TPR_11|PF13414.2|1.9e-07,TPR_2|PF07719.13|0.44,TPR_2|PF07719.13|0.0087,TPR_8|PF13181.2|0.038,TPR_8|PF13181.2|0.37,TPR_12|PF13424.2|8,TPR_12|PF13424.2|0.0028 S_Transcript_137674:3-344(-)
ATGTTGATTGATCAACAGGGAAACTTGGGCTGGGCCTACATGCAAAAACCAAATTACATGGCAGCAGAAGTGGTGTATAGAAAGGCCCAAATGATCGATCCTGATGCCAACAAGGCCTGTAACTTGGGCTTATGTTTGATAAAGCAGGCTCGTTACGAAGACGCCCGTTCAGTGCTTGAAGAAGTACTCAATCGCAAAGTTCCGGGCTCCGAGGATATCCGGGCACGTAATCGGGCCGAGGAACTGCTATTGGACTTGGAATCAAGGCAGCCCCCTCCTGTCCTATCCAATCTTGTGGGCCTCCGTTTGGATGATGAGTTTCTTGATGGGCTTAAGCAGCTT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_137674.p1 GENE.S_Transcript_137674~~S_Transcript_137674.p1 ORF type:3prime_partial len:115 (-),score=22.37,TPR_1|PF00515.24|0.0023,TPR_1|PF00515.24|0.1,TPR_11|PF13414.2|1.9e-07,TPR_2|PF07719.13|0.44,TPR_2|PF07719.13|0.0087,TPR_8|PF13181.2|0.038,TPR_8|PF13181.2|0.37,TPR_12|PF13424.2|8,TPR_12|PF13424.2|0.0028 S_Transcript_137674:3-344(-)
MLIDQQGNLGWAYMQKPNYMAAEVVYRKAQMIDPDANKACNLGLCLIKQARYEDARSVLEEVLNRKVPGSEDIRARNRAEELLLDLESRQPPPVLSNLVGLRLDDEFLDGLKQL

Click here to download the sequence:
Link to NCBI Protein BLAST